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SLC25A34 (solute carrier family 25 member 34)

Identity

Alias_namessolute carrier family 25, member 34
Alias_symbol (synonym)DKFZp781A10161
Other alias-
HGNC (Hugo) SLC25A34
LocusID (NCBI) 284723
Atlas_Id 73355
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 15736314 and ends at 15741392 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC25A34   27653
Cards
Entrez_Gene (NCBI)SLC25A34  284723  solute carrier family 25 member 34
Aliases
GeneCards (Weizmann)SLC25A34
Ensembl hg19 (Hinxton)ENSG00000162461 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162461 [Gene_View]  chr1:15736314-15741392 [Contig_View]  SLC25A34 [Vega]
ICGC DataPortalENSG00000162461
TCGA cBioPortalSLC25A34
AceView (NCBI)SLC25A34
Genatlas (Paris)SLC25A34
WikiGenes284723
SOURCE (Princeton)SLC25A34
Genetics Home Reference (NIH)SLC25A34
Genomic and cartography
GoldenPath hg38 (UCSC)SLC25A34  -     chr1:15736314-15741392 +  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC25A34  -     1p36.21   [Description]    (hg19-Feb_2009)
EnsemblSLC25A34 - 1p36.21 [CytoView hg19]  SLC25A34 - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBISLC25A34 [Mapview hg19]  SLC25A34 [Mapview hg38]
OMIM610817   
Gene and transcription
Genbank (Entrez)AK024244 AL832282 AW291716 BC027998 CR749264
RefSeq transcript (Entrez)NM_207348
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC25A34
Cluster EST : UnigeneHs.631867 [ NCBI ]
CGAP (NCI)Hs.631867
Alternative Splicing GalleryENSG00000162461
Gene ExpressionSLC25A34 [ NCBI-GEO ]   SLC25A34 [ EBI - ARRAY_EXPRESS ]   SLC25A34 [ SEEK ]   SLC25A34 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC25A34 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284723
GTEX Portal (Tissue expression)SLC25A34
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PIV7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PIV7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PIV7
Splice isoforms : SwissVarQ6PIV7
PhosPhoSitePlusQ6PIV7
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (EBI)Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
Conserved Domain (NCBI)SLC25A34
DMDM Disease mutations284723
Blocks (Seattle)SLC25A34
SuperfamilyQ6PIV7
Human Protein AtlasENSG00000162461
Peptide AtlasQ6PIV7
HPRD17340
IPIIPI00164191   
Protein Interaction databases
DIP (DOE-UCLA)Q6PIV7
IntAct (EBI)Q6PIV7
FunCoupENSG00000162461
BioGRIDSLC25A34
STRING (EMBL)SLC25A34
ZODIACSLC25A34
Ontologies - Pathways
QuickGOQ6PIV7
Ontology : AmiGOmitochondrial inner membrane  mitochondrial transport  integral component of membrane  transmembrane transporter activity  transmembrane transport  
Ontology : EGO-EBImitochondrial inner membrane  mitochondrial transport  integral component of membrane  transmembrane transporter activity  transmembrane transport  
NDEx NetworkSLC25A34
Atlas of Cancer Signalling NetworkSLC25A34
Wikipedia pathwaysSLC25A34
Orthology - Evolution
OrthoDB284723
GeneTree (enSembl)ENSG00000162461
Phylogenetic Trees/Animal Genes : TreeFamSLC25A34
HOVERGENQ6PIV7
HOGENOMQ6PIV7
Homologs : HomoloGeneSLC25A34
Homology/Alignments : Family Browser (UCSC)SLC25A34
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC25A34 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC25A34
dbVarSLC25A34
ClinVarSLC25A34
1000_GenomesSLC25A34 
Exome Variant ServerSLC25A34
ExAC (Exome Aggregation Consortium)SLC25A34 (select the gene name)
Genetic variants : HAPMAP284723
Genomic Variants (DGV)SLC25A34 [DGVbeta]
DECIPHERSLC25A34 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC25A34 
Mutations
ICGC Data PortalSLC25A34 
TCGA Data PortalSLC25A34 
Broad Tumor PortalSLC25A34
OASIS PortalSLC25A34 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC25A34  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC25A34
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch SLC25A34
DgiDB (Drug Gene Interaction Database)SLC25A34
DoCM (Curated mutations)SLC25A34 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC25A34 (select a term)
intoGenSLC25A34
Cancer3DSLC25A34(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610817   
Orphanet
MedgenSLC25A34
Genetic Testing Registry SLC25A34
NextProtQ6PIV7 [Medical]
TSGene284723
GENETestsSLC25A34
Target ValidationSLC25A34
Huge Navigator SLC25A34 [HugePedia]
snp3D : Map Gene to Disease284723
BioCentury BCIQSLC25A34
ClinGenSLC25A34
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284723
Chemical/Pharm GKB GenePA142670906
Clinical trialSLC25A34
Miscellaneous
canSAR (ICR)SLC25A34 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC25A34
EVEXSLC25A34
GoPubMedSLC25A34
iHOPSLC25A34
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:05 CEST 2017

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