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SLC25A35 (solute carrier family 25, member 35)

Identity

Alias_namessolute carrier family 25, member 35
Alias_symbol (synonym)FLJ40217
Other alias-
HGNC (Hugo) SLC25A35
LocusID (NCBI) 399512
Atlas_Id 73356
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 8191082 and ends at 8198170 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PSMB2 (1p34.3) / SLC25A35 (17p13.1)SLC25A35 (17p13.1) / CHD3 (17p13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC25A35   31921
Cards
Entrez_Gene (NCBI)SLC25A35  399512  solute carrier family 25, member 35
Aliases
GeneCards (Weizmann)SLC25A35
Ensembl hg19 (Hinxton)ENSG00000125434 [Gene_View]  chr17:8191082-8198170 [Contig_View]  SLC25A35 [Vega]
Ensembl hg38 (Hinxton)ENSG00000125434 [Gene_View]  chr17:8191082-8198170 [Contig_View]  SLC25A35 [Vega]
ICGC DataPortalENSG00000125434
TCGA cBioPortalSLC25A35
AceView (NCBI)SLC25A35
Genatlas (Paris)SLC25A35
WikiGenes399512
SOURCE (Princeton)SLC25A35
Genetics Home Reference (NIH)SLC25A35
Genomic and cartography
GoldenPath hg19 (UCSC)SLC25A35  -     chr17:8191082-8198170 -  17p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SLC25A35  -     17p13.1   [Description]    (hg38-Dec_2013)
EnsemblSLC25A35 - 17p13.1 [CytoView hg19]  SLC25A35 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBISLC25A35 [Mapview hg19]  SLC25A35 [Mapview hg38]
OMIM610818   
Gene and transcription
Genbank (Entrez)AK097536 AY498866 BC041597 BC052233 BC101329
RefSeq transcript (Entrez)NM_201520
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)SLC25A35
Cluster EST : UnigeneHs.118918 [ NCBI ]
CGAP (NCI)Hs.118918
Alternative Splicing GalleryENSG00000125434
Gene ExpressionSLC25A35 [ NCBI-GEO ]   SLC25A35 [ EBI - ARRAY_EXPRESS ]   SLC25A35 [ SEEK ]   SLC25A35 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC25A35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)399512
GTEX Portal (Tissue expression)SLC25A35
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3KQZ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3KQZ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3KQZ1
Splice isoforms : SwissVarQ3KQZ1
PhosPhoSitePlusQ3KQZ1
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (EBI)Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
Conserved Domain (NCBI)SLC25A35
DMDM Disease mutations399512
Blocks (Seattle)SLC25A35
SuperfamilyQ3KQZ1
Human Protein AtlasENSG00000125434
Peptide AtlasQ3KQZ1
HPRD13444
IPIIPI00654813   IPI00432939   IPI00847815   IPI00167392   
Protein Interaction databases
DIP (DOE-UCLA)Q3KQZ1
IntAct (EBI)Q3KQZ1
FunCoupENSG00000125434
BioGRIDSLC25A35
STRING (EMBL)SLC25A35
ZODIACSLC25A35
Ontologies - Pathways
QuickGOQ3KQZ1
Ontology : AmiGOmitochondrial inner membrane  transport  integral component of membrane  
Ontology : EGO-EBImitochondrial inner membrane  transport  integral component of membrane  
NDEx NetworkSLC25A35
Atlas of Cancer Signalling NetworkSLC25A35
Wikipedia pathwaysSLC25A35
Orthology - Evolution
OrthoDB399512
GeneTree (enSembl)ENSG00000125434
Phylogenetic Trees/Animal Genes : TreeFamSLC25A35
HOVERGENQ3KQZ1
HOGENOMQ3KQZ1
Homologs : HomoloGeneSLC25A35
Homology/Alignments : Family Browser (UCSC)SLC25A35
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC25A35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC25A35
dbVarSLC25A35
ClinVarSLC25A35
1000_GenomesSLC25A35 
Exome Variant ServerSLC25A35
ExAC (Exome Aggregation Consortium)SLC25A35 (select the gene name)
Genetic variants : HAPMAP399512
Genomic Variants (DGV)SLC25A35 [DGVbeta]
DECIPHER (Syndromes)17:8191082-8198170  ENSG00000125434
CONAN: Copy Number AnalysisSLC25A35 
Mutations
ICGC Data PortalSLC25A35 
TCGA Data PortalSLC25A35 
Broad Tumor PortalSLC25A35
OASIS PortalSLC25A35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC25A35  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC25A35
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch SLC25A35
DgiDB (Drug Gene Interaction Database)SLC25A35
DoCM (Curated mutations)SLC25A35 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC25A35 (select a term)
intoGenSLC25A35
Cancer3DSLC25A35(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610818   
Orphanet
MedgenSLC25A35
Genetic Testing Registry SLC25A35
NextProtQ3KQZ1 [Medical]
TSGene399512
GENETestsSLC25A35
Huge Navigator SLC25A35 [HugePedia]
snp3D : Map Gene to Disease399512
BioCentury BCIQSLC25A35
ClinGenSLC25A35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399512
Chemical/Pharm GKB GenePA142670907
Clinical trialSLC25A35
Miscellaneous
canSAR (ICR)SLC25A35 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC25A35
EVEXSLC25A35
GoPubMedSLC25A35
iHOPSLC25A35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:43:31 CET 2017

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