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SLC25A41 (solute carrier family 25 member 41)

Identity

Alias_namessolute carrier family 25, member 41
Alias_symbol (synonym)FLJ40442
MGC34725
APC4
Other alias
HGNC (Hugo) SLC25A41
LocusID (NCBI) 284427
Atlas_Id 73362
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 6426037 and ends at 6433779 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC25A41   28533
Cards
Entrez_Gene (NCBI)SLC25A41  284427  solute carrier family 25 member 41
AliasesAPC4
GeneCards (Weizmann)SLC25A41
Ensembl hg19 (Hinxton)ENSG00000181240 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181240 [Gene_View]  chr19:6426037-6433779 [Contig_View]  SLC25A41 [Vega]
ICGC DataPortalENSG00000181240
TCGA cBioPortalSLC25A41
AceView (NCBI)SLC25A41
Genatlas (Paris)SLC25A41
WikiGenes284427
SOURCE (Princeton)SLC25A41
Genetics Home Reference (NIH)SLC25A41
Genomic and cartography
GoldenPath hg38 (UCSC)SLC25A41  -     chr19:6426037-6433779 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC25A41  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblSLC25A41 - 19p13.3 [CytoView hg19]  SLC25A41 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBISLC25A41 [Mapview hg19]  SLC25A41 [Mapview hg38]
OMIM610822   
Gene and transcription
Genbank (Entrez)AK097761 BC031671
RefSeq transcript (Entrez)NM_001321298 NM_173637
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC25A41
Cluster EST : UnigeneHs.375135 [ NCBI ]
CGAP (NCI)Hs.375135
Alternative Splicing GalleryENSG00000181240
Gene ExpressionSLC25A41 [ NCBI-GEO ]   SLC25A41 [ EBI - ARRAY_EXPRESS ]   SLC25A41 [ SEEK ]   SLC25A41 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC25A41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284427
GTEX Portal (Tissue expression)SLC25A41
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N5S1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N5S1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N5S1
Splice isoforms : SwissVarQ8N5S1
PhosPhoSitePlusQ8N5S1
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (EBI)Mit_carrier    Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
Conserved Domain (NCBI)SLC25A41
DMDM Disease mutations284427
Blocks (Seattle)SLC25A41
SuperfamilyQ8N5S1
Human Protein AtlasENSG00000181240
Peptide AtlasQ8N5S1
HPRD14584
IPIIPI00175107   IPI00884931   
Protein Interaction databases
DIP (DOE-UCLA)Q8N5S1
IntAct (EBI)Q8N5S1
FunCoupENSG00000181240
BioGRIDSLC25A41
STRING (EMBL)SLC25A41
ZODIACSLC25A41
Ontologies - Pathways
QuickGOQ8N5S1
Ontology : AmiGOATP transmembrane transporter activity  mitochondrial inner membrane  mitochondrial transport  ADP transmembrane transporter activity  ADP transport  ATP transport  integral component of membrane  transmembrane transport  
Ontology : EGO-EBIATP transmembrane transporter activity  mitochondrial inner membrane  mitochondrial transport  ADP transmembrane transporter activity  ADP transport  ATP transport  integral component of membrane  transmembrane transport  
NDEx NetworkSLC25A41
Atlas of Cancer Signalling NetworkSLC25A41
Wikipedia pathwaysSLC25A41
Orthology - Evolution
OrthoDB284427
GeneTree (enSembl)ENSG00000181240
Phylogenetic Trees/Animal Genes : TreeFamSLC25A41
HOVERGENQ8N5S1
HOGENOMQ8N5S1
Homologs : HomoloGeneSLC25A41
Homology/Alignments : Family Browser (UCSC)SLC25A41
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC25A41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC25A41
dbVarSLC25A41
ClinVarSLC25A41
1000_GenomesSLC25A41 
Exome Variant ServerSLC25A41
ExAC (Exome Aggregation Consortium)SLC25A41 (select the gene name)
Genetic variants : HAPMAP284427
Genomic Variants (DGV)SLC25A41 [DGVbeta]
DECIPHERSLC25A41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC25A41 
Mutations
ICGC Data PortalSLC25A41 
TCGA Data PortalSLC25A41 
Broad Tumor PortalSLC25A41
OASIS PortalSLC25A41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC25A41  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC25A41
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SLC25A41
DgiDB (Drug Gene Interaction Database)SLC25A41
DoCM (Curated mutations)SLC25A41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC25A41 (select a term)
intoGenSLC25A41
Cancer3DSLC25A41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610822   
Orphanet
MedgenSLC25A41
Genetic Testing Registry SLC25A41
NextProtQ8N5S1 [Medical]
TSGene284427
GENETestsSLC25A41
Target ValidationSLC25A41
Huge Navigator SLC25A41 [HugePedia]
snp3D : Map Gene to Disease284427
BioCentury BCIQSLC25A41
ClinGenSLC25A41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284427
Chemical/Pharm GKB GenePA162403684
Clinical trialSLC25A41
Miscellaneous
canSAR (ICR)SLC25A41 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC25A41
EVEXSLC25A41
GoPubMedSLC25A41
iHOPSLC25A41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:06 CEST 2017

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