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SLC25A44 (solute carrier family 25 member 44)

Identity

Alias (NCBI)-
HGNC (Hugo) SLC25A44
HGNC Alias symbFLJ90431
KIAA0446
HGNC Previous namesolute carrier family 25, member 44
LocusID (NCBI) 9673
Atlas_Id 73363
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 156194104 and ends at 156212796 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ACTG1 (17q25.3) / SLC25A44 (1q22)SLC25A44 (1q22) / IGF2R (6q25.3)SLC25A44 (1q22) / LMNA (1q22)
SLC25A44 (1q22) / PMF1 (1q22)SLC25A44 (1q22) / PRKACB (1p31.1)SLC25A44 (1q22) / RIPK2 (8q21.3)
SLC25A44 (1q22) / SLC20A2 (8p11.21)ZNF395 (8p21.1) / SLC25A44 (1q22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)SLC25A44   29036
Cards
Entrez_Gene (NCBI)SLC25A44    solute carrier family 25 member 44
Aliases
GeneCards (Weizmann)SLC25A44
Ensembl hg19 (Hinxton)ENSG00000160785 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160785 [Gene_View]  ENSG00000160785 [Sequence]  chr1:156194104-156212796 [Contig_View]  SLC25A44 [Vega]
ICGC DataPortalENSG00000160785
TCGA cBioPortalSLC25A44
AceView (NCBI)SLC25A44
Genatlas (Paris)SLC25A44
SOURCE (Princeton)SLC25A44
Genetics Home Reference (NIH)SLC25A44
Genomic and cartography
GoldenPath hg38 (UCSC)SLC25A44  -     chr1:156194104-156212796 +  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC25A44  -     1q22   [Description]    (hg19-Feb_2009)
GoldenPathSLC25A44 - 1q22 [CytoView hg19]  SLC25A44 - 1q22 [CytoView hg38]
ImmunoBaseENSG00000160785
Genome Data Viewer NCBISLC25A44 [Mapview hg19]  
OMIM610824   
Gene and transcription
Genbank (Entrez)AB007915 AK074912 AK075002 AK293778 AK294524
RefSeq transcript (Entrez)NM_001135672 NM_001286184 NM_001377385 NM_001377386 NM_001377387 NM_001377388 NM_001377389 NM_001377390 NM_014655
Consensus coding sequences : CCDS (NCBI)SLC25A44
Gene ExpressionSLC25A44 [ NCBI-GEO ]   SLC25A44 [ EBI - ARRAY_EXPRESS ]   SLC25A44 [ SEEK ]   SLC25A44 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC25A44 [ Firebrowse - Broad ]
GenevisibleExpression of SLC25A44 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9673
GTEX Portal (Tissue expression)SLC25A44
Human Protein AtlasENSG00000160785-SLC25A44 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96H78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96H78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96H78
PhosPhoSitePlusQ96H78
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (EBI)Mit_carrier    Mitochondrial_sb/sol_carrier    Mt_carrier_dom_sf    SLC25A44   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
Conserved Domain (NCBI)SLC25A44
SuperfamilyQ96H78
AlphaFold pdb e-kbQ96H78   
Human Protein Atlas [tissue]ENSG00000160785-SLC25A44 [tissue]
HPRD17190
Protein Interaction databases
DIP (DOE-UCLA)Q96H78
IntAct (EBI)Q96H78
BioGRIDSLC25A44
STRING (EMBL)SLC25A44
ZODIACSLC25A44
Ontologies - Pathways
QuickGOQ96H78
Ontology : AmiGOmitochondrion  branched-chain amino acid catabolic process  branched-chain amino acid transmembrane transporter activity  branched-chain amino acid transport  integral component of membrane  mitochondrial membrane  transmembrane transport  regulation of cold-induced thermogenesis  
Ontology : EGO-EBImitochondrion  branched-chain amino acid catabolic process  branched-chain amino acid transmembrane transporter activity  branched-chain amino acid transport  integral component of membrane  mitochondrial membrane  transmembrane transport  regulation of cold-induced thermogenesis  
NDEx NetworkSLC25A44
Atlas of Cancer Signalling NetworkSLC25A44
Wikipedia pathwaysSLC25A44
Orthology - Evolution
OrthoDB9673
GeneTree (enSembl)ENSG00000160785
Phylogenetic Trees/Animal Genes : TreeFamSLC25A44
Homologs : HomoloGeneSLC25A44
Homology/Alignments : Family Browser (UCSC)SLC25A44
Gene fusions - Rearrangements
Fusion : QuiverSLC25A44
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC25A44 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC25A44
dbVarSLC25A44
ClinVarSLC25A44
MonarchSLC25A44
1000_GenomesSLC25A44 
Exome Variant ServerSLC25A44
GNOMAD BrowserENSG00000160785
Varsome BrowserSLC25A44
ACMGSLC25A44 variants
VarityQ96H78
Genomic Variants (DGV)SLC25A44 [DGVbeta]
DECIPHERSLC25A44 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC25A44 
Mutations
ICGC Data PortalSLC25A44 
TCGA Data PortalSLC25A44 
Broad Tumor PortalSLC25A44
OASIS PortalSLC25A44 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC25A44  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DSLC25A44
Mutations and Diseases : HGMDSLC25A44
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaSLC25A44
DgiDB (Drug Gene Interaction Database)SLC25A44
DoCM (Curated mutations)SLC25A44
CIViC (Clinical Interpretations of Variants in Cancer)SLC25A44
Cancer3DSLC25A44
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610824   
Orphanet
DisGeNETSLC25A44
MedgenSLC25A44
Genetic Testing Registry SLC25A44
NextProtQ96H78 [Medical]
GENETestsSLC25A44
Target ValidationSLC25A44
Huge Navigator SLC25A44 [HugePedia]
ClinGenSLC25A44
Clinical trials, drugs, therapy
MyCancerGenomeSLC25A44
Protein Interactions : CTDSLC25A44
Pharm GKB GenePA162403705
PharosQ96H78
Clinical trialSLC25A44
Miscellaneous
canSAR (ICR)SLC25A44
HarmonizomeSLC25A44
DataMed IndexSLC25A44
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSLC25A44
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:20:52 CEST 2021

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