Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SLC25A5-AS1 (SLC25A5 antisense RNA 1)

Identity

Alias_namesSLC25A5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SLC25A5-AS1
LocusID (NCBI) 100303728
Atlas_Id 73371
Location Xq24  [Link to chromosome band Xq24]
Location_base_pair Starts at 119466033 and ends at 119469120 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC25A5-AS1   43438
Cards
Entrez_Gene (NCBI)SLC25A5-AS1  100303728  SLC25A5 antisense RNA 1
Aliases
GeneCards (Weizmann)SLC25A5-AS1
Ensembl hg19 (Hinxton)ENSG00000224281 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224281 [Gene_View]  chrX:119466033-119469120 [Contig_View]  SLC25A5-AS1 [Vega]
ICGC DataPortalENSG00000224281
TCGA cBioPortalSLC25A5-AS1
AceView (NCBI)SLC25A5-AS1
Genatlas (Paris)SLC25A5-AS1
WikiGenes100303728
SOURCE (Princeton)SLC25A5-AS1
Genetics Home Reference (NIH)SLC25A5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SLC25A5-AS1  -     chrX:119466033-119469120 -  Xq24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC25A5-AS1  -     Xq24   [Description]    (hg19-Feb_2009)
EnsemblSLC25A5-AS1 - Xq24 [CytoView hg19]  SLC25A5-AS1 - Xq24 [CytoView hg38]
Mapping of homologs : NCBISLC25A5-AS1 [Mapview hg19]  SLC25A5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI380428 AI471629 AK092094 AK094280 BC028211
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC25A5-AS1
Cluster EST : UnigeneHs.742239 [ NCBI ]
CGAP (NCI)Hs.742239
Alternative Splicing GalleryENSG00000224281
Gene ExpressionSLC25A5-AS1 [ NCBI-GEO ]   SLC25A5-AS1 [ EBI - ARRAY_EXPRESS ]   SLC25A5-AS1 [ SEEK ]   SLC25A5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC25A5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100303728
GTEX Portal (Tissue expression)SLC25A5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC25A5-AS1
DMDM Disease mutations100303728
Blocks (Seattle)SLC25A5-AS1
Human Protein AtlasENSG00000224281
IPIIPI00848130   IPI00168122   
Protein Interaction databases
FunCoupENSG00000224281
BioGRIDSLC25A5-AS1
STRING (EMBL)SLC25A5-AS1
ZODIACSLC25A5-AS1
Ontologies - Pathways
Huge Navigator SLC25A5-AS1 [HugePedia]
snp3D : Map Gene to Disease100303728
BioCentury BCIQSLC25A5-AS1
ClinGenSLC25A5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100303728
Clinical trialSLC25A5-AS1
Miscellaneous
canSAR (ICR)SLC25A5-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC25A5-AS1
EVEXSLC25A5-AS1
GoPubMedSLC25A5-AS1
iHOPSLC25A5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:08 CEST 2017

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