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SLC25A52 (solute carrier family 25 member 52)

Identity

Alias_namesMCART2
mitochondrial carrier triple repeat 2
solute carrier family 25, member 52
Other alias
HGNC (Hugo) SLC25A52
LocusID (NCBI) 147407
Atlas_Id 73369
Location 18q12.1  [Link to chromosome band 18q12]
Location_base_pair Starts at 31759696 and ends at 31760880 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC25A52   23324
Cards
Entrez_Gene (NCBI)SLC25A52  147407  solute carrier family 25 member 52
AliasesMCART2
GeneCards (Weizmann)SLC25A52
Ensembl hg19 (Hinxton)ENSG00000141437 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141437 [Gene_View]  chr18:31759696-31760880 [Contig_View]  SLC25A52 [Vega]
ICGC DataPortalENSG00000141437
TCGA cBioPortalSLC25A52
AceView (NCBI)SLC25A52
Genatlas (Paris)SLC25A52
WikiGenes147407
SOURCE (Princeton)SLC25A52
Genetics Home Reference (NIH)SLC25A52
Genomic and cartography
GoldenPath hg38 (UCSC)SLC25A52  -     chr18:31759696-31760880 -  18q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC25A52  -     18q12.1   [Description]    (hg19-Feb_2009)
EnsemblSLC25A52 - 18q12.1 [CytoView hg19]  SLC25A52 - 18q12.1 [CytoView hg38]
Mapping of homologs : NCBISLC25A52 [Mapview hg19]  SLC25A52 [Mapview hg38]
OMIM616153   
Gene and transcription
Genbank (Entrez)AK302337 BC103999 BC104000 BC104001 DB057843
RefSeq transcript (Entrez)NM_001034172
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC25A52
Cluster EST : UnigeneHs.567708 [ NCBI ]
CGAP (NCI)Hs.567708
Alternative Splicing GalleryENSG00000141437
Gene ExpressionSLC25A52 [ NCBI-GEO ]   SLC25A52 [ EBI - ARRAY_EXPRESS ]   SLC25A52 [ SEEK ]   SLC25A52 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC25A52 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)147407
GTEX Portal (Tissue expression)SLC25A52
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3SY17   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3SY17  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3SY17
Splice isoforms : SwissVarQ3SY17
PhosPhoSitePlusQ3SY17
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (EBI)Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
Conserved Domain (NCBI)SLC25A52
DMDM Disease mutations147407
Blocks (Seattle)SLC25A52
SuperfamilyQ3SY17
Human Protein AtlasENSG00000141437
Peptide AtlasQ3SY17
HPRD18732
IPIIPI01011594   IPI00081097   
Protein Interaction databases
DIP (DOE-UCLA)Q3SY17
IntAct (EBI)Q3SY17
FunCoupENSG00000141437
BioGRIDSLC25A52
STRING (EMBL)SLC25A52
ZODIACSLC25A52
Ontologies - Pathways
QuickGOQ3SY17
Ontology : AmiGOmitochondrial inner membrane  mitochondrial transport  integral component of membrane  transmembrane transporter activity  transmembrane transport  
Ontology : EGO-EBImitochondrial inner membrane  mitochondrial transport  integral component of membrane  transmembrane transporter activity  transmembrane transport  
NDEx NetworkSLC25A52
Atlas of Cancer Signalling NetworkSLC25A52
Wikipedia pathwaysSLC25A52
Orthology - Evolution
OrthoDB147407
GeneTree (enSembl)ENSG00000141437
Phylogenetic Trees/Animal Genes : TreeFamSLC25A52
HOVERGENQ3SY17
HOGENOMQ3SY17
Homologs : HomoloGeneSLC25A52
Homology/Alignments : Family Browser (UCSC)SLC25A52
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC25A52 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC25A52
dbVarSLC25A52
ClinVarSLC25A52
1000_GenomesSLC25A52 
Exome Variant ServerSLC25A52
ExAC (Exome Aggregation Consortium)SLC25A52 (select the gene name)
Genetic variants : HAPMAP147407
Genomic Variants (DGV)SLC25A52 [DGVbeta]
DECIPHERSLC25A52 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC25A52 
Mutations
ICGC Data PortalSLC25A52 
TCGA Data PortalSLC25A52 
Broad Tumor PortalSLC25A52
OASIS PortalSLC25A52 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDSLC25A52
BioMutasearch SLC25A52
DgiDB (Drug Gene Interaction Database)SLC25A52
DoCM (Curated mutations)SLC25A52 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC25A52 (select a term)
intoGenSLC25A52
Cancer3DSLC25A52(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616153   
Orphanet
MedgenSLC25A52
Genetic Testing Registry SLC25A52
NextProtQ3SY17 [Medical]
TSGene147407
GENETestsSLC25A52
Target ValidationSLC25A52
Huge Navigator SLC25A52 [HugePedia]
snp3D : Map Gene to Disease147407
BioCentury BCIQSLC25A52
ClinGenSLC25A52
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147407
Chemical/Pharm GKB GenePA134957999
Clinical trialSLC25A52
Miscellaneous
canSAR (ICR)SLC25A52 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC25A52
EVEXSLC25A52
GoPubMedSLC25A52
iHOPSLC25A52
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:07 CEST 2017

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