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SLC2A10 (solute carrier family 2 member 10)

Identity

Alias (NCBI)ATORS
ATS
GLUT10
HGNC (Hugo) SLC2A10
HGNC Alias symbGLUT10
HGNC Previous namesolute carrier family 2 (facilitated glucose transporter), member 10
LocusID (NCBI) 81031
Atlas_Id 54635
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 46709649 and ends at 46736346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BROX (1q41) / SLC2A10 (20q13.12)EYA2 (20q13.12) / SLC2A10 (20q13.12)SLC2A10 (20q13.12) / MGAT1 (5q35.3)
SLC2A10 (20q13.12) / MSI2 (17q22)SLC2A10 (20q13.12) / ZMYND8 (20q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)SLC2A10   13444
Cards
Entrez_Gene (NCBI)SLC2A10    solute carrier family 2 member 10
AliasesATORS; ATS; GLUT10
GeneCards (Weizmann)SLC2A10
Ensembl hg19 (Hinxton)ENSG00000197496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197496 [Gene_View]  ENSG00000197496 [Sequence]  chr20:46709649-46736346 [Contig_View]  SLC2A10 [Vega]
ICGC DataPortalENSG00000197496
TCGA cBioPortalSLC2A10
AceView (NCBI)SLC2A10
Genatlas (Paris)SLC2A10
SOURCE (Princeton)SLC2A10
Genetics Home Reference (NIH)SLC2A10
Genomic and cartography
GoldenPath hg38 (UCSC)SLC2A10  -     chr20:46709649-46736346 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC2A10  -     20q13.12   [Description]    (hg19-Feb_2009)
GoldenPathSLC2A10 - 20q13.12 [CytoView hg19]  SLC2A10 - 20q13.12 [CytoView hg38]
ImmunoBaseENSG00000197496
Genome Data Viewer NCBISLC2A10 [Mapview hg19]  
OMIM208050   606145   
Gene and transcription
Genbank (Entrez)AF248053 AF321240 AF479407 AK055548 AK290961
RefSeq transcript (Entrez)NM_030777
Consensus coding sequences : CCDS (NCBI)SLC2A10
Gene ExpressionSLC2A10 [ NCBI-GEO ]   SLC2A10 [ EBI - ARRAY_EXPRESS ]   SLC2A10 [ SEEK ]   SLC2A10 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC2A10 [ Firebrowse - Broad ]
GenevisibleExpression of SLC2A10 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81031
GTEX Portal (Tissue expression)SLC2A10
Human Protein AtlasENSG00000197496-SLC2A10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95528   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95528  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95528
PhosPhoSitePlusO95528
Domaine pattern : Prosite (Expaxy)MFS (PS50850)    SUGAR_TRANSPORT_1 (PS00216)   
Domains : Interpro (EBI)MFS_dom    MFS_sugar_transport-like    MFS_trans_sf    Sugar/inositol_transpt    Sugar_transporter_CS   
Domain families : Pfam (Sanger)Sugar_tr (PF00083)   
Domain families : Pfam (NCBI)pfam00083   
Conserved Domain (NCBI)SLC2A10
SuperfamilyO95528
AlphaFold pdb e-kbO95528   
Human Protein Atlas [tissue]ENSG00000197496-SLC2A10 [tissue]
HPRD05851
Protein Interaction databases
DIP (DOE-UCLA)O95528
IntAct (EBI)O95528
BioGRIDSLC2A10
STRING (EMBL)SLC2A10
ZODIACSLC2A10
Ontologies - Pathways
QuickGOO95528
Ontology : AmiGOcarbohydrate:proton symporter activity  plasma membrane  plasma membrane  integral component of plasma membrane  hexose transmembrane transport  positive regulation of gene expression  negative regulation of gene expression  endomembrane system  galactose transmembrane transport  integral component of membrane  positive regulation of transforming growth factor beta receptor signaling pathway  negative regulation of transforming growth factor beta receptor signaling pathway  negative regulation of connective tissue growth factor production  dehydroascorbic acid transmembrane transporter activity  skin development  cell redox homeostasis  perinuclear region of cytoplasm  D-glucose transmembrane transporter activity  negative regulation of SMAD protein signal transduction  artery development  dehydroascorbic acid transport  embryonic skeletal joint development  glucose import across plasma membrane  transport across blood-brain barrier  proton transmembrane transport  negative regulation of proteoglycan biosynthetic process  positive regulation of proteoglycan biosynthetic process  regulation of extracellular matrix organization  glucose transmembrane transport  negative regulation of integrin-mediated signaling pathway  
Ontology : EGO-EBIcarbohydrate:proton symporter activity  plasma membrane  plasma membrane  integral component of plasma membrane  hexose transmembrane transport  positive regulation of gene expression  negative regulation of gene expression  endomembrane system  galactose transmembrane transport  integral component of membrane  positive regulation of transforming growth factor beta receptor signaling pathway  negative regulation of transforming growth factor beta receptor signaling pathway  negative regulation of connective tissue growth factor production  dehydroascorbic acid transmembrane transporter activity  skin development  cell redox homeostasis  perinuclear region of cytoplasm  D-glucose transmembrane transporter activity  negative regulation of SMAD protein signal transduction  artery development  dehydroascorbic acid transport  embryonic skeletal joint development  glucose import across plasma membrane  transport across blood-brain barrier  proton transmembrane transport  negative regulation of proteoglycan biosynthetic process  positive regulation of proteoglycan biosynthetic process  regulation of extracellular matrix organization  glucose transmembrane transport  negative regulation of integrin-mediated signaling pathway  
NDEx NetworkSLC2A10
Atlas of Cancer Signalling NetworkSLC2A10
Wikipedia pathwaysSLC2A10
Orthology - Evolution
OrthoDB81031
GeneTree (enSembl)ENSG00000197496
Phylogenetic Trees/Animal Genes : TreeFamSLC2A10
Homologs : HomoloGeneSLC2A10
Homology/Alignments : Family Browser (UCSC)SLC2A10
Gene fusions - Rearrangements
Fusion : MitelmanEYA2/SLC2A10 [20q13.12/20q13.12]  
Fusion : QuiverSLC2A10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC2A10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC2A10
dbVarSLC2A10
ClinVarSLC2A10
MonarchSLC2A10
1000_GenomesSLC2A10 
Exome Variant ServerSLC2A10
GNOMAD BrowserENSG00000197496
Varsome BrowserSLC2A10
ACMGSLC2A10 variants
VarityO95528
Genomic Variants (DGV)SLC2A10 [DGVbeta]
DECIPHERSLC2A10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC2A10 
Mutations
ICGC Data PortalSLC2A10 
TCGA Data PortalSLC2A10 
Broad Tumor PortalSLC2A10
OASIS PortalSLC2A10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC2A10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DSLC2A10
Mutations and Diseases : HGMDSLC2A10
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaSLC2A10
DgiDB (Drug Gene Interaction Database)SLC2A10
DoCM (Curated mutations)SLC2A10
CIViC (Clinical Interpretations of Variants in Cancer)SLC2A10
Cancer3DSLC2A10
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM208050    606145   
Orphanet2965   
DisGeNETSLC2A10
MedgenSLC2A10
Genetic Testing Registry SLC2A10
NextProtO95528 [Medical]
GENETestsSLC2A10
Target ValidationSLC2A10
Huge Navigator SLC2A10 [HugePedia]
ClinGenSLC2A10
Clinical trials, drugs, therapy
MyCancerGenomeSLC2A10
Protein Interactions : CTDSLC2A10
Pharm GKB GenePA37769
PharosO95528
Clinical trialSLC2A10
Miscellaneous
canSAR (ICR)SLC2A10
HarmonizomeSLC2A10
DataMed IndexSLC2A10
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSLC2A10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:31:39 CEST 2021

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