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SLC2A7 (solute carrier family 2 member 7)

Identity

Alias_namessolute carrier family 2 (facilitated glucose transporter), member 7
Alias_symbol (synonym)GLUT7
Other alias
HGNC (Hugo) SLC2A7
LocusID (NCBI) 155184
Atlas_Id 73385
Location 1p36.23  [Link to chromosome band 1p36]
Location_base_pair Starts at 9003300 and ends at 9026345 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC2A7   13445
Cards
Entrez_Gene (NCBI)SLC2A7  155184  solute carrier family 2 member 7
AliasesGLUT7
GeneCards (Weizmann)SLC2A7
Ensembl hg19 (Hinxton)ENSG00000197241 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197241 [Gene_View]  chr1:9003300-9026345 [Contig_View]  SLC2A7 [Vega]
ICGC DataPortalENSG00000197241
TCGA cBioPortalSLC2A7
AceView (NCBI)SLC2A7
Genatlas (Paris)SLC2A7
WikiGenes155184
SOURCE (Princeton)SLC2A7
Genetics Home Reference (NIH)SLC2A7
Genomic and cartography
GoldenPath hg38 (UCSC)SLC2A7  -     chr1:9003300-9026345 -  1p36.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC2A7  -     1p36.23   [Description]    (hg19-Feb_2009)
EnsemblSLC2A7 - 1p36.23 [CytoView hg19]  SLC2A7 - 1p36.23 [CytoView hg38]
Mapping of homologs : NCBISLC2A7 [Mapview hg19]  SLC2A7 [Mapview hg38]
OMIM610371   
Gene and transcription
Genbank (Entrez)AY571960 BC152830
RefSeq transcript (Entrez)NM_207420
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC2A7
Cluster EST : UnigeneHs.531239 [ NCBI ]
CGAP (NCI)Hs.531239
Alternative Splicing GalleryENSG00000197241
Gene ExpressionSLC2A7 [ NCBI-GEO ]   SLC2A7 [ EBI - ARRAY_EXPRESS ]   SLC2A7 [ SEEK ]   SLC2A7 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC2A7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)155184
GTEX Portal (Tissue expression)SLC2A7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PXP3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PXP3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PXP3
Splice isoforms : SwissVarQ6PXP3
PhosPhoSitePlusQ6PXP3
Domaine pattern : Prosite (Expaxy)MFS (PS50850)    SUGAR_TRANSPORT_1 (PS00216)    SUGAR_TRANSPORT_2 (PS00217)   
Domains : Interpro (EBI)MFS_dom    MFS_sugar_transport-like    Sugar/inositol_transpt    Sugar_transporter_CS   
Domain families : Pfam (Sanger)Sugar_tr (PF00083)   
Domain families : Pfam (NCBI)pfam00083   
Conserved Domain (NCBI)SLC2A7
DMDM Disease mutations155184
Blocks (Seattle)SLC2A7
PDB (SRS)1YG7   
PDB (PDBSum)1YG7   
PDB (IMB)1YG7   
PDB (RSDB)1YG7   
Structural Biology KnowledgeBase1YG7   
SCOP (Structural Classification of Proteins)1YG7   
CATH (Classification of proteins structures)1YG7   
SuperfamilyQ6PXP3
Human Protein AtlasENSG00000197241
Peptide AtlasQ6PXP3
HPRD15365
IPIIPI00057815   
Protein Interaction databases
DIP (DOE-UCLA)Q6PXP3
IntAct (EBI)Q6PXP3
FunCoupENSG00000197241
BioGRIDSLC2A7
STRING (EMBL)SLC2A7
ZODIACSLC2A7
Ontologies - Pathways
QuickGOQ6PXP3
Ontology : AmiGOplasma membrane  integral component of membrane  carbohydrate transmembrane transport  sugar transmembrane transporter activity  
Ontology : EGO-EBIplasma membrane  integral component of membrane  carbohydrate transmembrane transport  sugar transmembrane transporter activity  
NDEx NetworkSLC2A7
Atlas of Cancer Signalling NetworkSLC2A7
Wikipedia pathwaysSLC2A7
Orthology - Evolution
OrthoDB155184
GeneTree (enSembl)ENSG00000197241
Phylogenetic Trees/Animal Genes : TreeFamSLC2A7
HOVERGENQ6PXP3
HOGENOMQ6PXP3
Homologs : HomoloGeneSLC2A7
Homology/Alignments : Family Browser (UCSC)SLC2A7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC2A7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC2A7
dbVarSLC2A7
ClinVarSLC2A7
1000_GenomesSLC2A7 
Exome Variant ServerSLC2A7
ExAC (Exome Aggregation Consortium)SLC2A7 (select the gene name)
Genetic variants : HAPMAP155184
Genomic Variants (DGV)SLC2A7 [DGVbeta]
DECIPHERSLC2A7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC2A7 
Mutations
ICGC Data PortalSLC2A7 
TCGA Data PortalSLC2A7 
Broad Tumor PortalSLC2A7
OASIS PortalSLC2A7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC2A7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC2A7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SLC2A7
DgiDB (Drug Gene Interaction Database)SLC2A7
DoCM (Curated mutations)SLC2A7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC2A7 (select a term)
intoGenSLC2A7
Cancer3DSLC2A7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610371   
Orphanet
MedgenSLC2A7
Genetic Testing Registry SLC2A7
NextProtQ6PXP3 [Medical]
TSGene155184
GENETestsSLC2A7
Target ValidationSLC2A7
Huge Navigator SLC2A7 [HugePedia]
snp3D : Map Gene to Disease155184
BioCentury BCIQSLC2A7
ClinGenSLC2A7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD155184
Chemical/Pharm GKB GenePA37770
Clinical trialSLC2A7
Miscellaneous
canSAR (ICR)SLC2A7 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC2A7
EVEXSLC2A7
GoPubMedSLC2A7
iHOPSLC2A7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:10 CEST 2017

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