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SLC35F6 (solute carrier family 35 member F6)

Identity

Alias (NCBI)ANT2BP
C2orf18
TANGO9
HGNC (Hugo) SLC35F6
HGNC Alias symbFLJ20555
ANT2BP
TANGO9
HGNC Alias nameANT2-binding protein
 transport and golgi organization 9 homolog (Drosophila)
HGNC Previous nameC2orf18
HGNC Previous namechromosome 2 open reading frame 18
 solute carrier family 35, member F6
LocusID (NCBI) 54978
Atlas_Id 50845
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 26764284 and ends at 26781231 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)SLC35F6   26055
Cards
Entrez_Gene (NCBI)SLC35F6    solute carrier family 35 member F6
AliasesANT2BP; C2orf18; TANGO9
GeneCards (Weizmann)SLC35F6
Ensembl hg19 (Hinxton)ENSG00000213699 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213699 [Gene_View]  ENSG00000213699 [Sequence]  chr2:26764284-26781231 [Contig_View]  SLC35F6 [Vega]
ICGC DataPortalENSG00000213699
TCGA cBioPortalSLC35F6
AceView (NCBI)SLC35F6
Genatlas (Paris)SLC35F6
SOURCE (Princeton)SLC35F6
Genetics Home Reference (NIH)SLC35F6
Genomic and cartography
GoldenPath hg38 (UCSC)SLC35F6  -     chr2:26764284-26781231 +  2p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC35F6  -     2p23.3   [Description]    (hg19-Feb_2009)
GoldenPathSLC35F6 - 2p23.3 [CytoView hg19]  SLC35F6 - 2p23.3 [CytoView hg38]
ImmunoBaseENSG00000213699
Genome Data Viewer NCBISLC35F6 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK000562 AK025889 AK075164 AK222929 AK296996
RefSeq transcript (Entrez)NM_017877
Consensus coding sequences : CCDS (NCBI)SLC35F6
Gene ExpressionSLC35F6 [ NCBI-GEO ]   SLC35F6 [ EBI - ARRAY_EXPRESS ]   SLC35F6 [ SEEK ]   SLC35F6 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC35F6 [ Firebrowse - Broad ]
GenevisibleExpression of SLC35F6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54978
GTEX Portal (Tissue expression)SLC35F6
Human Protein AtlasENSG00000213699-SLC35F6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N357   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N357  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N357
PhosPhoSitePlusQ8N357
Domains : Interpro (EBI)SLC35_F1/F2/F6    UCP036436   
Domain families : Pfam (Sanger)SLC35F (PF06027)   
Domain families : Pfam (NCBI)pfam06027   
Conserved Domain (NCBI)SLC35F6
SuperfamilyQ8N357
AlphaFold pdb e-kbQ8N357   
Human Protein Atlas [tissue]ENSG00000213699-SLC35F6 [tissue]
HPRD12808
Protein Interaction databases
DIP (DOE-UCLA)Q8N357
IntAct (EBI)Q8N357
BioGRIDSLC35F6
STRING (EMBL)SLC35F6
ZODIACSLC35F6
Ontologies - Pathways
QuickGOQ8N357
Ontology : AmiGOprotein binding  nucleoplasm  mitochondrion  lysosomal membrane  lysosomal membrane  cytosol  positive regulation of cell population proliferation  membrane  integral component of membrane  transmembrane transporter activity  intracellular membrane-bounded organelle  intracellular membrane-bounded organelle  transmembrane transport  extracellular exosome  negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  
Ontology : EGO-EBIprotein binding  nucleoplasm  mitochondrion  lysosomal membrane  lysosomal membrane  cytosol  positive regulation of cell population proliferation  membrane  integral component of membrane  transmembrane transporter activity  intracellular membrane-bounded organelle  intracellular membrane-bounded organelle  transmembrane transport  extracellular exosome  negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  
NDEx NetworkSLC35F6
Atlas of Cancer Signalling NetworkSLC35F6
Wikipedia pathwaysSLC35F6
Orthology - Evolution
OrthoDB54978
GeneTree (enSembl)ENSG00000213699
Phylogenetic Trees/Animal Genes : TreeFamSLC35F6
Homologs : HomoloGeneSLC35F6
Homology/Alignments : Family Browser (UCSC)SLC35F6
Gene fusions - Rearrangements
Fusion : QuiverSLC35F6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC35F6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC35F6
dbVarSLC35F6
ClinVarSLC35F6
MonarchSLC35F6
1000_GenomesSLC35F6 
Exome Variant ServerSLC35F6
GNOMAD BrowserENSG00000213699
Varsome BrowserSLC35F6
ACMGSLC35F6 variants
VarityQ8N357
Genomic Variants (DGV)SLC35F6 [DGVbeta]
DECIPHERSLC35F6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC35F6 
Mutations
ICGC Data PortalSLC35F6 
TCGA Data PortalSLC35F6 
Broad Tumor PortalSLC35F6
OASIS PortalSLC35F6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC35F6  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DSLC35F6
Mutations and Diseases : HGMDSLC35F6
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaSLC35F6
DgiDB (Drug Gene Interaction Database)SLC35F6
DoCM (Curated mutations)SLC35F6
CIViC (Clinical Interpretations of Variants in Cancer)SLC35F6
Cancer3DSLC35F6
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETSLC35F6
MedgenSLC35F6
Genetic Testing Registry SLC35F6
NextProtQ8N357 [Medical]
GENETestsSLC35F6
Target ValidationSLC35F6
Huge Navigator SLC35F6 [HugePedia]
ClinGenSLC35F6
Clinical trials, drugs, therapy
MyCancerGenomeSLC35F6
Protein Interactions : CTDSLC35F6
Pharm GKB GenePA134913368
PharosQ8N357
Clinical trialSLC35F6
Miscellaneous
canSAR (ICR)SLC35F6
HarmonizomeSLC35F6
DataMed IndexSLC35F6
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSLC35F6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:31:45 CEST 2021

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