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SLC35G1 (solute carrier family 35 member G1)

Identity

Alias (NCBI)C10orf60
POST
TMEM20
HGNC (Hugo) SLC35G1
HGNC Alias symbFLJ33990
C10orf60
HGNC Previous nameTMEM20
HGNC Previous nametransmembrane protein 20
 solute carrier family 35, member G1
LocusID (NCBI) 159371
Atlas_Id 73414
Location 10q23.33  [Link to chromosome band 10q23]
Location_base_pair Starts at 93893978 and ends at 93903824 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)SLC35G1   26607
Cards
Entrez_Gene (NCBI)SLC35G1    solute carrier family 35 member G1
AliasesC10orf60; POST; TMEM20
GeneCards (Weizmann)SLC35G1
Ensembl hg19 (Hinxton)ENSG00000176273 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176273 [Gene_View]  ENSG00000176273 [Sequence]  chr10:93893978-93903824 [Contig_View]  SLC35G1 [Vega]
ICGC DataPortalENSG00000176273
TCGA cBioPortalSLC35G1
AceView (NCBI)SLC35G1
Genatlas (Paris)SLC35G1
SOURCE (Princeton)SLC35G1
Genetics Home Reference (NIH)SLC35G1
Genomic and cartography
GoldenPath hg38 (UCSC)SLC35G1  -     chr10:93893978-93903824 +  10q23.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC35G1  -     10q23.33   [Description]    (hg19-Feb_2009)
GoldenPathSLC35G1 - 10q23.33 [CytoView hg19]  SLC35G1 - 10q23.33 [CytoView hg38]
ImmunoBaseENSG00000176273
Genome Data Viewer NCBISLC35G1 [Mapview hg19]  
OMIM617167   
Gene and transcription
Genbank (Entrez)AK091309 AK123062 AK123734 BC036382 BC041432
RefSeq transcript (Entrez)NM_001134658 NM_001345993 NM_153226
Consensus coding sequences : CCDS (NCBI)SLC35G1
Gene ExpressionSLC35G1 [ NCBI-GEO ]   SLC35G1 [ EBI - ARRAY_EXPRESS ]   SLC35G1 [ SEEK ]   SLC35G1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC35G1 [ Firebrowse - Broad ]
GenevisibleExpression of SLC35G1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)159371
GTEX Portal (Tissue expression)SLC35G1
Human Protein AtlasENSG00000176273-SLC35G1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M3R5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M3R5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M3R5
PhosPhoSitePlusQ2M3R5
Domains : Interpro (EBI)EamA_dom   
Domain families : Pfam (Sanger)EamA (PF00892)   
Domain families : Pfam (NCBI)pfam00892   
Conserved Domain (NCBI)SLC35G1
SuperfamilyQ2M3R5
AlphaFold pdb e-kbQ2M3R5   
Human Protein Atlas [tissue]ENSG00000176273-SLC35G1 [tissue]
HPRD15531
Protein Interaction databases
DIP (DOE-UCLA)Q2M3R5
IntAct (EBI)Q2M3R5
BioGRIDSLC35G1
STRING (EMBL)SLC35G1
ZODIACSLC35G1
Ontologies - Pathways
QuickGOQ2M3R5
Ontology : AmiGOprotein binding  endoplasmic reticulum membrane  endoplasmic reticulum membrane  plasma membrane  plasma membrane  integral component of membrane  regulation of cytosolic calcium ion concentration  regulation of cytosolic calcium ion concentration  calcium ion export across plasma membrane  calcium ion export across plasma membrane  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum membrane  endoplasmic reticulum membrane  plasma membrane  plasma membrane  integral component of membrane  regulation of cytosolic calcium ion concentration  regulation of cytosolic calcium ion concentration  calcium ion export across plasma membrane  calcium ion export across plasma membrane  
NDEx NetworkSLC35G1
Atlas of Cancer Signalling NetworkSLC35G1
Wikipedia pathwaysSLC35G1
Orthology - Evolution
OrthoDB159371
GeneTree (enSembl)ENSG00000176273
Phylogenetic Trees/Animal Genes : TreeFamSLC35G1
Homologs : HomoloGeneSLC35G1
Homology/Alignments : Family Browser (UCSC)SLC35G1
Gene fusions - Rearrangements
Fusion : QuiverSLC35G1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC35G1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC35G1
dbVarSLC35G1
ClinVarSLC35G1
MonarchSLC35G1
1000_GenomesSLC35G1 
Exome Variant ServerSLC35G1
GNOMAD BrowserENSG00000176273
Varsome BrowserSLC35G1
ACMGSLC35G1 variants
VarityQ2M3R5
Genomic Variants (DGV)SLC35G1 [DGVbeta]
DECIPHERSLC35G1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC35G1 
Mutations
ICGC Data PortalSLC35G1 
TCGA Data PortalSLC35G1 
Broad Tumor PortalSLC35G1
OASIS PortalSLC35G1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC35G1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DSLC35G1
Mutations and Diseases : HGMDSLC35G1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaSLC35G1
DgiDB (Drug Gene Interaction Database)SLC35G1
DoCM (Curated mutations)SLC35G1
CIViC (Clinical Interpretations of Variants in Cancer)SLC35G1
Cancer3DSLC35G1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617167   
Orphanet
DisGeNETSLC35G1
MedgenSLC35G1
Genetic Testing Registry SLC35G1
NextProtQ2M3R5 [Medical]
GENETestsSLC35G1
Target ValidationSLC35G1
Huge Navigator SLC35G1 [HugePedia]
ClinGenSLC35G1
Clinical trials, drugs, therapy
MyCancerGenomeSLC35G1
Protein Interactions : CTDSLC35G1
Pharm GKB GenePA134933626
PharosQ2M3R5
Clinical trialSLC35G1
Miscellaneous
canSAR (ICR)SLC35G1
HarmonizomeSLC35G1
DataMed IndexSLC35G1
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSLC35G1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:21:01 CEST 2021

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