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SLC35G3 (solute carrier family 35 member G3)

Identity

Alias_namesTMEM21A
AMAC1
transmembrane protein 21A
acyl-malonyl condensing enzyme 1
solute carrier family 35, member G3
Alias_symbol (synonym)FLJ40154
Other alias
HGNC (Hugo) SLC35G3
LocusID (NCBI) 146861
Atlas_Id 73415
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 35192520 and ends at 35194393 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC35G3   26848
Cards
Entrez_Gene (NCBI)SLC35G3  146861  solute carrier family 35 member G3
AliasesAMAC1; TMEM21A
GeneCards (Weizmann)SLC35G3
Ensembl hg19 (Hinxton)ENSG00000164729 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164729 [Gene_View]  chr17:35192520-35194393 [Contig_View]  SLC35G3 [Vega]
ICGC DataPortalENSG00000164729
TCGA cBioPortalSLC35G3
AceView (NCBI)SLC35G3
Genatlas (Paris)SLC35G3
WikiGenes146861
SOURCE (Princeton)SLC35G3
Genetics Home Reference (NIH)SLC35G3
Genomic and cartography
GoldenPath hg38 (UCSC)SLC35G3  -     chr17:35192520-35194393 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC35G3  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblSLC35G3 - 17q12 [CytoView hg19]  SLC35G3 - 17q12 [CytoView hg38]
Mapping of homologs : NCBISLC35G3 [Mapview hg19]  SLC35G3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097473 BC136422 BC140700
RefSeq transcript (Entrez)NM_152462
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC35G3
Cluster EST : UnigeneHs.514814 [ NCBI ]
CGAP (NCI)Hs.514814
Alternative Splicing GalleryENSG00000164729
Gene ExpressionSLC35G3 [ NCBI-GEO ]   SLC35G3 [ EBI - ARRAY_EXPRESS ]   SLC35G3 [ SEEK ]   SLC35G3 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC35G3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146861
GTEX Portal (Tissue expression)SLC35G3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N808   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N808  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N808
Splice isoforms : SwissVarQ8N808
PhosPhoSitePlusQ8N808
Domains : Interpro (EBI)EamA_dom   
Domain families : Pfam (Sanger)EamA (PF00892)   
Domain families : Pfam (NCBI)pfam00892   
Conserved Domain (NCBI)SLC35G3
DMDM Disease mutations146861
Blocks (Seattle)SLC35G3
SuperfamilyQ8N808
Human Protein AtlasENSG00000164729
Peptide AtlasQ8N808
HPRD12450
IPIIPI00167273   
Protein Interaction databases
DIP (DOE-UCLA)Q8N808
IntAct (EBI)Q8N808
FunCoupENSG00000164729
BioGRIDSLC35G3
STRING (EMBL)SLC35G3
ZODIACSLC35G3
Ontologies - Pathways
QuickGOQ8N808
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkSLC35G3
Atlas of Cancer Signalling NetworkSLC35G3
Wikipedia pathwaysSLC35G3
Orthology - Evolution
OrthoDB146861
GeneTree (enSembl)ENSG00000164729
Phylogenetic Trees/Animal Genes : TreeFamSLC35G3
HOVERGENQ8N808
HOGENOMQ8N808
Homologs : HomoloGeneSLC35G3
Homology/Alignments : Family Browser (UCSC)SLC35G3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC35G3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC35G3
dbVarSLC35G3
ClinVarSLC35G3
1000_GenomesSLC35G3 
Exome Variant ServerSLC35G3
ExAC (Exome Aggregation Consortium)SLC35G3 (select the gene name)
Genetic variants : HAPMAP146861
Genomic Variants (DGV)SLC35G3 [DGVbeta]
DECIPHERSLC35G3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC35G3 
Mutations
ICGC Data PortalSLC35G3 
TCGA Data PortalSLC35G3 
Broad Tumor PortalSLC35G3
OASIS PortalSLC35G3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDSLC35G3
BioMutasearch SLC35G3
DgiDB (Drug Gene Interaction Database)SLC35G3
DoCM (Curated mutations)SLC35G3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC35G3 (select a term)
intoGenSLC35G3
Cancer3DSLC35G3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSLC35G3
Genetic Testing Registry SLC35G3
NextProtQ8N808 [Medical]
TSGene146861
GENETestsSLC35G3
Target ValidationSLC35G3
Huge Navigator SLC35G3 [HugePedia]
snp3D : Map Gene to Disease146861
BioCentury BCIQSLC35G3
ClinGenSLC35G3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146861
Chemical/Pharm GKB GenePA134902447
Clinical trialSLC35G3
Miscellaneous
canSAR (ICR)SLC35G3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC35G3
EVEXSLC35G3
GoPubMedSLC35G3
iHOPSLC35G3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:38:11 CEST 2017

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