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SLC35G5 (solute carrier family 35 member G5)

Identity

Alias_namesAMAC
AMAC1L2
acyl-malonyl condensing enzyme 1-like 2
solute carrier family 35, member G5
Other alias
HGNC (Hugo) SLC35G5
LocusID (NCBI) 83650
Atlas_Id 73417
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 11330986 and ends at 11332186 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC35G5   15546
Cards
Entrez_Gene (NCBI)SLC35G5  83650  solute carrier family 35 member G5
AliasesAMAC; AMAC1L2
GeneCards (Weizmann)SLC35G5
Ensembl hg19 (Hinxton)ENSG00000177710 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177710 [Gene_View]  chr8:11330986-11332186 [Contig_View]  SLC35G5 [Vega]
ICGC DataPortalENSG00000177710
TCGA cBioPortalSLC35G5
AceView (NCBI)SLC35G5
Genatlas (Paris)SLC35G5
WikiGenes83650
SOURCE (Princeton)SLC35G5
Genetics Home Reference (NIH)SLC35G5
Genomic and cartography
GoldenPath hg38 (UCSC)SLC35G5  -     chr8:11330986-11332186 +  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC35G5  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblSLC35G5 - 8p23.1 [CytoView hg19]  SLC35G5 - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBISLC35G5 [Mapview hg19]  SLC35G5 [Mapview hg38]
OMIM615199   
Gene and transcription
Genbank (Entrez)AJ291677 BC131696
RefSeq transcript (Entrez)NM_054028
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC35G5
Cluster EST : UnigeneHs.458397 [ NCBI ]
CGAP (NCI)Hs.458397
Alternative Splicing GalleryENSG00000177710
Gene ExpressionSLC35G5 [ NCBI-GEO ]   SLC35G5 [ EBI - ARRAY_EXPRESS ]   SLC35G5 [ SEEK ]   SLC35G5 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC35G5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83650
GTEX Portal (Tissue expression)SLC35G5
Human Protein AtlasENSG00000177710-SLC35G5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96KT7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96KT7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96KT7
Splice isoforms : SwissVarQ96KT7
PhosPhoSitePlusQ96KT7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC35G5
DMDM Disease mutations83650
Blocks (Seattle)SLC35G5
SuperfamilyQ96KT7
Human Protein Atlas [tissue]ENSG00000177710-SLC35G5 [tissue]
Peptide AtlasQ96KT7
HPRD09796
IPIIPI00064799   
Protein Interaction databases
DIP (DOE-UCLA)Q96KT7
IntAct (EBI)Q96KT7
FunCoupENSG00000177710
BioGRIDSLC35G5
STRING (EMBL)SLC35G5
ZODIACSLC35G5
Ontologies - Pathways
QuickGOQ96KT7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkSLC35G5
Atlas of Cancer Signalling NetworkSLC35G5
Wikipedia pathwaysSLC35G5
Orthology - Evolution
OrthoDB83650
GeneTree (enSembl)ENSG00000177710
Phylogenetic Trees/Animal Genes : TreeFamSLC35G5
HOVERGENQ96KT7
HOGENOMQ96KT7
Homologs : HomoloGeneSLC35G5
Homology/Alignments : Family Browser (UCSC)SLC35G5
Gene fusions - Rearrangements
Tumor Fusion PortalSLC35G5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC35G5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC35G5
dbVarSLC35G5
ClinVarSLC35G5
1000_GenomesSLC35G5 
Exome Variant ServerSLC35G5
ExAC (Exome Aggregation Consortium)ENSG00000177710
GNOMAD BrowserENSG00000177710
Genetic variants : HAPMAP83650
Genomic Variants (DGV)SLC35G5 [DGVbeta]
DECIPHERSLC35G5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC35G5 
Mutations
ICGC Data PortalSLC35G5 
TCGA Data PortalSLC35G5 
Broad Tumor PortalSLC35G5
OASIS PortalSLC35G5 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDSLC35G5
BioMutasearch SLC35G5
DgiDB (Drug Gene Interaction Database)SLC35G5
DoCM (Curated mutations)SLC35G5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC35G5 (select a term)
intoGenSLC35G5
Cancer3DSLC35G5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615199   
Orphanet
DisGeNETSLC35G5
MedgenSLC35G5
Genetic Testing Registry SLC35G5
NextProtQ96KT7 [Medical]
TSGene83650
GENETestsSLC35G5
Target ValidationSLC35G5
Huge Navigator SLC35G5 [HugePedia]
snp3D : Map Gene to Disease83650
BioCentury BCIQSLC35G5
ClinGenSLC35G5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83650
Chemical/Pharm GKB GenePA24756
Clinical trialSLC35G5
Miscellaneous
canSAR (ICR)SLC35G5 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC35G5
EVEXSLC35G5
GoPubMedSLC35G5
iHOPSLC35G5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:18:58 CET 2017

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