SLC36A2 (solute carrier family 36 member 2)

2014-11-01  

Identity

HGNC
LOCATION
5q33.1
LOCUSID
ALIAS
PAT2,TRAMD1
FUSION GENES

Other Information

Locus ID:

NCBI: 153201
MIM: 608331
HGNC: 18762
Ensembl: ENSG00000186335

Variants:

dbSNP: 153201
ClinVar: 153201
TCGA: ENSG00000186335
COSMIC: SLC36A2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000186335ENST00000335244Q495M3
ENSG00000186335ENST00000518280E5RGH8
ENSG00000186335ENST00000518617E5RGH8
ENSG00000186335ENST00000521967E5RJJ5
ENSG00000186335ENST00000523044H0YB43

Expression (GTEx)

0
5
10
15
20
25
30
35

Pathways

PathwaySourceExternal ID
Transmembrane transport of small moleculesREACTOMER-HSA-382551
SLC-mediated transmembrane transportREACTOMER-HSA-425407
Transport of inorganic cations/anions and amino acids/oligopeptidesREACTOMER-HSA-425393
Amino acid transport across the plasma membraneREACTOMER-HSA-352230
Proton-coupled neutral amino acid transportersREACTOMER-HSA-428559

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
192400612009Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.75
250804782014ASC-1, PAT2, and P2RX5 are cell surface markers for white, beige, and brown adipocytes.54
198458952009Fine mapping of the CELIAC2 locus on chromosome 5q31-q33 in the Finnish and Hungarian populations.3

Citation

Dessen P

SLC36A2 (solute carrier family 36 member 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73419/slc36a2