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SLC37A3 (solute carrier family 37 member 3)

Identity

Alias_namessolute carrier family 37, member 3
Alias_symbol (synonym)DKFZp761N0624
Other alias-
HGNC (Hugo) SLC37A3
LocusID (NCBI) 84255
Atlas_Id 73423
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 140333752 and ends at 140398550 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
B2M (15q21.1) / SLC37A3 (7q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC37A3   20651
Cards
Entrez_Gene (NCBI)SLC37A3  84255  solute carrier family 37 member 3
Aliases
GeneCards (Weizmann)SLC37A3
Ensembl hg19 (Hinxton)ENSG00000157800 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157800 [Gene_View]  chr7:140333752-140398550 [Contig_View]  SLC37A3 [Vega]
ICGC DataPortalENSG00000157800
TCGA cBioPortalSLC37A3
AceView (NCBI)SLC37A3
Genatlas (Paris)SLC37A3
WikiGenes84255
SOURCE (Princeton)SLC37A3
Genetics Home Reference (NIH)SLC37A3
Genomic and cartography
GoldenPath hg38 (UCSC)SLC37A3  -     chr7:140333752-140398550 -  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC37A3  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblSLC37A3 - 7q34 [CytoView hg19]  SLC37A3 - 7q34 [CytoView hg38]
Mapping of homologs : NCBISLC37A3 [Mapview hg19]  SLC37A3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074823 AK126589 AK131347 AK296543 AK299276
RefSeq transcript (Entrez)NM_001287498 NM_032295 NM_207113
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC37A3
Cluster EST : UnigeneHs.738791 [ NCBI ]
CGAP (NCI)Hs.738791
Alternative Splicing GalleryENSG00000157800
Gene ExpressionSLC37A3 [ NCBI-GEO ]   SLC37A3 [ EBI - ARRAY_EXPRESS ]   SLC37A3 [ SEEK ]   SLC37A3 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC37A3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84255
GTEX Portal (Tissue expression)SLC37A3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCC5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCC5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCC5
Splice isoforms : SwissVarQ8NCC5
PhosPhoSitePlusQ8NCC5
Domaine pattern : Prosite (Expaxy)MFS (PS50850)   
Domains : Interpro (EBI)MFS    MFS_dom    Sugar_P_transporter   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)SLC37A3
DMDM Disease mutations84255
Blocks (Seattle)SLC37A3
SuperfamilyQ8NCC5
Human Protein AtlasENSG00000157800
Peptide AtlasQ8NCC5
HPRD15381
IPIIPI00301460   IPI00872825   IPI00031097   IPI01015970   IPI00946427   IPI00945189   IPI01018351   IPI00945388   IPI00945708   IPI00945025   IPI00946266   IPI00947374   IPI00947158   IPI00947557   IPI00945934   IPI00946115   IPI00945713   IPI00945558   IPI00946660   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCC5
IntAct (EBI)Q8NCC5
FunCoupENSG00000157800
BioGRIDSLC37A3
STRING (EMBL)SLC37A3
ZODIACSLC37A3
Ontologies - Pathways
QuickGOQ8NCC5
Ontology : AmiGOcytosol  carbohydrate transport  glucose-6-phosphate transport  integral component of endoplasmic reticulum membrane  phosphate ion transmembrane transport  glucose 6-phosphate:inorganic phosphate antiporter activity  
Ontology : EGO-EBIcytosol  carbohydrate transport  glucose-6-phosphate transport  integral component of endoplasmic reticulum membrane  phosphate ion transmembrane transport  glucose 6-phosphate:inorganic phosphate antiporter activity  
NDEx NetworkSLC37A3
Atlas of Cancer Signalling NetworkSLC37A3
Wikipedia pathwaysSLC37A3
Orthology - Evolution
OrthoDB84255
GeneTree (enSembl)ENSG00000157800
Phylogenetic Trees/Animal Genes : TreeFamSLC37A3
HOVERGENQ8NCC5
HOGENOMQ8NCC5
Homologs : HomoloGeneSLC37A3
Homology/Alignments : Family Browser (UCSC)SLC37A3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC37A3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC37A3
dbVarSLC37A3
ClinVarSLC37A3
1000_GenomesSLC37A3 
Exome Variant ServerSLC37A3
ExAC (Exome Aggregation Consortium)SLC37A3 (select the gene name)
Genetic variants : HAPMAP84255
Genomic Variants (DGV)SLC37A3 [DGVbeta]
DECIPHERSLC37A3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC37A3 
Mutations
ICGC Data PortalSLC37A3 
TCGA Data PortalSLC37A3 
Broad Tumor PortalSLC37A3
OASIS PortalSLC37A3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC37A3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC37A3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SLC37A3
DgiDB (Drug Gene Interaction Database)SLC37A3
DoCM (Curated mutations)SLC37A3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC37A3 (select a term)
intoGenSLC37A3
Cancer3DSLC37A3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSLC37A3
Genetic Testing Registry SLC37A3
NextProtQ8NCC5 [Medical]
TSGene84255
GENETestsSLC37A3
Target ValidationSLC37A3
Huge Navigator SLC37A3 [HugePedia]
snp3D : Map Gene to Disease84255
BioCentury BCIQSLC37A3
ClinGenSLC37A3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84255
Chemical/Pharm GKB GenePA134895240
Clinical trialSLC37A3
Miscellaneous
canSAR (ICR)SLC37A3 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC37A3
EVEXSLC37A3
GoPubMedSLC37A3
iHOPSLC37A3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:18 CEST 2017

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