Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SLC39A12-AS1 (SLC39A12 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SLC39A12-AS1
LocusID (NCBI) 100129213
Atlas_Id 73433
Location 10p12.33  [Link to chromosome band 10p12]
Location_base_pair Starts at 18001786 and ends at 18010562 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC39A12-AS1   44881
Cards
Entrez_Gene (NCBI)SLC39A12-AS1  100129213  SLC39A12 antisense RNA 1
Aliases
GeneCards (Weizmann)SLC39A12-AS1
Ensembl hg19 (Hinxton)ENSG00000226083 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226083 [Gene_View]  chr10:18001786-18010562 [Contig_View]  SLC39A12-AS1 [Vega]
ICGC DataPortalENSG00000226083
TCGA cBioPortalSLC39A12-AS1
AceView (NCBI)SLC39A12-AS1
Genatlas (Paris)SLC39A12-AS1
WikiGenes100129213
SOURCE (Princeton)SLC39A12-AS1
Genetics Home Reference (NIH)SLC39A12-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SLC39A12-AS1  -     chr10:18001786-18010562 -  10p12.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC39A12-AS1  -     10p12.33   [Description]    (hg19-Feb_2009)
EnsemblSLC39A12-AS1 - 10p12.33 [CytoView hg19]  SLC39A12-AS1 - 10p12.33 [CytoView hg38]
Mapping of homologs : NCBISLC39A12-AS1 [Mapview hg19]  SLC39A12-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055012
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC39A12-AS1
Cluster EST : UnigeneHs.568816 [ NCBI ]
CGAP (NCI)Hs.568816
Alternative Splicing GalleryENSG00000226083
Gene ExpressionSLC39A12-AS1 [ NCBI-GEO ]   SLC39A12-AS1 [ EBI - ARRAY_EXPRESS ]   SLC39A12-AS1 [ SEEK ]   SLC39A12-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC39A12-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129213
GTEX Portal (Tissue expression)SLC39A12-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC39A12-AS1
DMDM Disease mutations100129213
Blocks (Seattle)SLC39A12-AS1
Human Protein AtlasENSG00000226083
IPIIPI00748177   
Protein Interaction databases
FunCoupENSG00000226083
BioGRIDSLC39A12-AS1
STRING (EMBL)SLC39A12-AS1
ZODIACSLC39A12-AS1
Ontologies - Pathways
Huge Navigator SLC39A12-AS1 [HugePedia]
snp3D : Map Gene to Disease100129213
BioCentury BCIQSLC39A12-AS1
ClinGenSLC39A12-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129213
Clinical trialSLC39A12-AS1
Miscellaneous
canSAR (ICR)SLC39A12-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC39A12-AS1
EVEXSLC39A12-AS1
GoPubMedSLC39A12-AS1
iHOPSLC39A12-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:19 CEST 2017

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