Atlas of Genetics and Cytogenetics in Oncology and Haematology

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SLC39A12-AS1 (SLC39A12 antisense RNA 1)


Alias (NCBI)-
HGNC (Hugo) SLC39A12-AS1
LocusID (NCBI) 100129213
Atlas_Id 73433
Location 10p12.33  [Link to chromosome band 10p12]
Location_base_pair Starts at 18001786 and ends at 18010562 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)SLC39A12-AS1   44881
Entrez_Gene (NCBI)SLC39A12-AS1    SLC39A12 antisense RNA 1
GeneCards (Weizmann)SLC39A12-AS1
Ensembl hg19 (Hinxton)ENSG00000226083 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226083 [Gene_View]  ENSG00000226083 [Sequence]  chr10:18001786-18010562 [Contig_View]  SLC39A12-AS1 [Vega]
ICGC DataPortalENSG00000226083
TCGA cBioPortalSLC39A12-AS1
AceView (NCBI)SLC39A12-AS1
Genatlas (Paris)SLC39A12-AS1
SOURCE (Princeton)SLC39A12-AS1
Genetics Home Reference (NIH)SLC39A12-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SLC39A12-AS1  -     chr10:18001786-18010562 -  10p12.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC39A12-AS1  -     10p12.33   [Description]    (hg19-Feb_2009)
GoldenPathSLC39A12-AS1 - 10p12.33 [CytoView hg19]  SLC39A12-AS1 - 10p12.33 [CytoView hg38]
Genome Data Viewer NCBISLC39A12-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055012
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC39A12-AS1
Gene ExpressionSLC39A12-AS1 [ NCBI-GEO ]   SLC39A12-AS1 [ EBI - ARRAY_EXPRESS ]   SLC39A12-AS1 [ SEEK ]   SLC39A12-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC39A12-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of SLC39A12-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129213
GTEX Portal (Tissue expression)SLC39A12-AS1
Human Protein AtlasENSG00000226083-SLC39A12-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC39A12-AS1
Human Protein Atlas [tissue]ENSG00000226083-SLC39A12-AS1 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:21:04 CEST 2021

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