Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SLC7A11-AS1 (SLC7A11 antisense RNA 1)

Identity

Alias_namesSLC7A11 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SLC7A11-AS1
LocusID (NCBI) 641364
Atlas_Id 73482
Location 4q28.3  [Link to chromosome band 4q28]
Location_base_pair Starts at 139010168 and ends at 139099331 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC7A11-AS1   44064
Cards
Entrez_Gene (NCBI)SLC7A11-AS1  641364  SLC7A11 antisense RNA 1
Aliases
GeneCards (Weizmann)SLC7A11-AS1
Ensembl hg19 (Hinxton)ENSG00000250033 [Gene_View]  chr4:139010168-139099331 [Contig_View]  SLC7A11-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000250033 [Gene_View]  chr4:139010168-139099331 [Contig_View]  SLC7A11-AS1 [Vega]
ICGC DataPortalENSG00000250033
TCGA cBioPortalSLC7A11-AS1
AceView (NCBI)SLC7A11-AS1
Genatlas (Paris)SLC7A11-AS1
WikiGenes641364
SOURCE (Princeton)SLC7A11-AS1
Genetics Home Reference (NIH)SLC7A11-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SLC7A11-AS1  -     chr4:139010168-139099331 +  4q28.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SLC7A11-AS1  -     4q28.3   [Description]    (hg38-Dec_2013)
EnsemblSLC7A11-AS1 - 4q28.3 [CytoView hg19]  SLC7A11-AS1 - 4q28.3 [CytoView hg38]
Mapping of homologs : NCBISLC7A11-AS1 [Mapview hg19]  SLC7A11-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040999 DB443521
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)SLC7A11-AS1
Cluster EST : UnigeneHs.570846 [ NCBI ]
CGAP (NCI)Hs.570846
Alternative Splicing GalleryENSG00000250033
Gene ExpressionSLC7A11-AS1 [ NCBI-GEO ]   SLC7A11-AS1 [ EBI - ARRAY_EXPRESS ]   SLC7A11-AS1 [ SEEK ]   SLC7A11-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC7A11-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)641364
GTEX Portal (Tissue expression)SLC7A11-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC7A11-AS1
DMDM Disease mutations641364
Blocks (Seattle)SLC7A11-AS1
Human Protein AtlasENSG00000250033
Protein Interaction databases
FunCoupENSG00000250033
BioGRIDSLC7A11-AS1
STRING (EMBL)SLC7A11-AS1
ZODIACSLC7A11-AS1
Ontologies - Pathways
Huge Navigator SLC7A11-AS1 [HugePedia]
snp3D : Map Gene to Disease641364
BioCentury BCIQSLC7A11-AS1
ClinGenSLC7A11-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD641364
Clinical trialSLC7A11-AS1
Miscellaneous
canSAR (ICR)SLC7A11-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC7A11-AS1
EVEXSLC7A11-AS1
GoPubMedSLC7A11-AS1
iHOPSLC7A11-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:43:55 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.