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SLC7A14 (solute carrier family 7 member 14)

Identity

Alias_namessolute carrier family 7, member 14
Alias_symbol (synonym)KIAA1613
PPP1R142
Other alias
HGNC (Hugo) SLC7A14
LocusID (NCBI) 57709
Atlas_Id 73483
Location 3q26.2  [Link to chromosome band 3q26]
Location_base_pair Starts at 170459554 and ends at 170586074 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC7A14   29326
Cards
Entrez_Gene (NCBI)SLC7A14  57709  solute carrier family 7 member 14
AliasesPPP1R142
GeneCards (Weizmann)SLC7A14
Ensembl hg19 (Hinxton)ENSG00000013293 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000013293 [Gene_View]  chr3:170459554-170586074 [Contig_View]  SLC7A14 [Vega]
ICGC DataPortalENSG00000013293
TCGA cBioPortalSLC7A14
AceView (NCBI)SLC7A14
Genatlas (Paris)SLC7A14
WikiGenes57709
SOURCE (Princeton)SLC7A14
Genetics Home Reference (NIH)SLC7A14
Genomic and cartography
GoldenPath hg38 (UCSC)SLC7A14  -     chr3:170459554-170586074 -  3q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC7A14  -     3q26.2   [Description]    (hg19-Feb_2009)
EnsemblSLC7A14 - 3q26.2 [CytoView hg19]  SLC7A14 - 3q26.2 [CytoView hg38]
Mapping of homologs : NCBISLC7A14 [Mapview hg19]  SLC7A14 [Mapview hg38]
OMIM615720   615725   
Gene and transcription
Genbank (Entrez)AB046833 AK094547 AK122655 BC022968 DA475001
RefSeq transcript (Entrez)NM_020949 NM_175917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC7A14
Cluster EST : UnigeneHs.596660 [ NCBI ]
CGAP (NCI)Hs.596660
Alternative Splicing GalleryENSG00000013293
Gene ExpressionSLC7A14 [ NCBI-GEO ]   SLC7A14 [ EBI - ARRAY_EXPRESS ]   SLC7A14 [ SEEK ]   SLC7A14 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC7A14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57709
GTEX Portal (Tissue expression)SLC7A14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBB6
Splice isoforms : SwissVarQ8TBB6
PhosPhoSitePlusQ8TBB6
Domains : Interpro (EBI)AA/rel_permease1    CAT_C   
Domain families : Pfam (Sanger)AA_permease_2 (PF13520)    AA_permease_C (PF13906)   
Domain families : Pfam (NCBI)pfam13520    pfam13906   
Conserved Domain (NCBI)SLC7A14
DMDM Disease mutations57709
Blocks (Seattle)SLC7A14
SuperfamilyQ8TBB6
Human Protein AtlasENSG00000013293
Peptide AtlasQ8TBB6
HPRD17222
IPIIPI00152183   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBB6
IntAct (EBI)Q8TBB6
FunCoupENSG00000013293
BioGRIDSLC7A14
STRING (EMBL)SLC7A14
ZODIACSLC7A14
Ontologies - Pathways
QuickGOQ8TBB6
Ontology : AmiGOamino acid transmembrane transport  lysosome  lysosomal membrane  negative regulation of phosphatase activity  amino acid transmembrane transporter activity  integral component of membrane  
Ontology : EGO-EBIamino acid transmembrane transport  lysosome  lysosomal membrane  negative regulation of phosphatase activity  amino acid transmembrane transporter activity  integral component of membrane  
NDEx NetworkSLC7A14
Atlas of Cancer Signalling NetworkSLC7A14
Wikipedia pathwaysSLC7A14
Orthology - Evolution
OrthoDB57709
GeneTree (enSembl)ENSG00000013293
Phylogenetic Trees/Animal Genes : TreeFamSLC7A14
HOVERGENQ8TBB6
HOGENOMQ8TBB6
Homologs : HomoloGeneSLC7A14
Homology/Alignments : Family Browser (UCSC)SLC7A14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC7A14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC7A14
dbVarSLC7A14
ClinVarSLC7A14
1000_GenomesSLC7A14 
Exome Variant ServerSLC7A14
ExAC (Exome Aggregation Consortium)SLC7A14 (select the gene name)
Genetic variants : HAPMAP57709
Genomic Variants (DGV)SLC7A14 [DGVbeta]
DECIPHERSLC7A14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC7A14 
Mutations
ICGC Data PortalSLC7A14 
TCGA Data PortalSLC7A14 
Broad Tumor PortalSLC7A14
OASIS PortalSLC7A14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC7A14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC7A14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SLC7A14
DgiDB (Drug Gene Interaction Database)SLC7A14
DoCM (Curated mutations)SLC7A14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC7A14 (select a term)
intoGenSLC7A14
Cancer3DSLC7A14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615720    615725   
Orphanet659   
MedgenSLC7A14
Genetic Testing Registry SLC7A14
NextProtQ8TBB6 [Medical]
TSGene57709
GENETestsSLC7A14
Target ValidationSLC7A14
Huge Navigator SLC7A14 [HugePedia]
snp3D : Map Gene to Disease57709
BioCentury BCIQSLC7A14
ClinGenSLC7A14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57709
Chemical/Pharm GKB GenePA142670913
Clinical trialSLC7A14
Miscellaneous
canSAR (ICR)SLC7A14 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC7A14
EVEXSLC7A14
GoPubMedSLC7A14
iHOPSLC7A14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:41:28 CEST 2017

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