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SLC9A9-AS1 (SLC9A9 antisense RNA 1)

Identity

Alias_namesSLC9A9 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SLC9A9-AS1
LocusID (NCBI) 100885796
Atlas_Id 73500
Location 3q24  [Link to chromosome band 3q24]
Location_base_pair Starts at 143061088 and ends at 143065913 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC9A9-AS1   40928
Cards
Entrez_Gene (NCBI)SLC9A9-AS1  100885796  SLC9A9 antisense RNA 1
Aliases
GeneCards (Weizmann)SLC9A9-AS1
Ensembl hg19 (Hinxton)ENSG00000240012 [Gene_View]  chr3:143061088-143065913 [Contig_View]  SLC9A9-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000240012 [Gene_View]  chr3:143061088-143065913 [Contig_View]  SLC9A9-AS1 [Vega]
ICGC DataPortalENSG00000240012
TCGA cBioPortalSLC9A9-AS1
AceView (NCBI)SLC9A9-AS1
Genatlas (Paris)SLC9A9-AS1
WikiGenes100885796
SOURCE (Princeton)SLC9A9-AS1
Genetics Home Reference (NIH)SLC9A9-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SLC9A9-AS1  -     chr3:143061088-143065913 +  3q24   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SLC9A9-AS1  -     3q24   [Description]    (hg38-Dec_2013)
EnsemblSLC9A9-AS1 - 3q24 [CytoView hg19]  SLC9A9-AS1 - 3q24 [CytoView hg38]
Mapping of homologs : NCBISLC9A9-AS1 [Mapview hg19]  SLC9A9-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB338547 HG496139
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)SLC9A9-AS1
Cluster EST : UnigeneHs.581618 [ NCBI ]
CGAP (NCI)Hs.581618
Alternative Splicing GalleryENSG00000240012
Gene ExpressionSLC9A9-AS1 [ NCBI-GEO ]   SLC9A9-AS1 [ EBI - ARRAY_EXPRESS ]   SLC9A9-AS1 [ SEEK ]   SLC9A9-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC9A9-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100885796
GTEX Portal (Tissue expression)SLC9A9-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC9A9-AS1
DMDM Disease mutations100885796
Blocks (Seattle)SLC9A9-AS1
Human Protein AtlasENSG00000240012
Protein Interaction databases
FunCoupENSG00000240012
BioGRIDSLC9A9-AS1
STRING (EMBL)SLC9A9-AS1
ZODIACSLC9A9-AS1
Ontologies - Pathways
Huge Navigator SLC9A9-AS1 [HugePedia]
snp3D : Map Gene to Disease100885796
BioCentury BCIQSLC9A9-AS1
ClinGenSLC9A9-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885796
Clinical trialSLC9A9-AS1
Miscellaneous
canSAR (ICR)SLC9A9-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC9A9-AS1
EVEXSLC9A9-AS1
GoPubMedSLC9A9-AS1
iHOPSLC9A9-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:43:58 CET 2017

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