SLCO3A1 (solute carrier organic anion transporter family member 3A1)

2011-07-01  

Identity

HGNC
SLCO3A1
LOCATION
15q26.1
LOCUSID
28232
ALIAS
OATP-D,OATP-RP3,OATP3A1,OATPD,OATPRP3,SLC21A11
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 28232
MIM: 612435
HGNC: 10952
Ensembl: ENSG00000176463

Variants:

dbSNP: 28232
ClinVar: 28232
TCGA: ENSG00000176463
COSMIC: SLCO3A1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000176463ENST00000318445Q9UIG8
ENSG00000176463ENST00000424469Q9UIG8
ENSG00000176463ENST00000553304G3V2B7
ENSG00000176463ENST00000555210H0YJM0
ENSG00000176463ENST00000555892G3V3K4

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Transmembrane transport of small moleculesREACTOMER-HSA-382551
SLC-mediated transmembrane transportREACTOMER-HSA-425407
Transport of vitamins, nucleosides, and related moleculesREACTOMER-HSA-425397
Transport of organic anionsREACTOMER-HSA-879518

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
169714912007Characterization of two splice variants of human organic anion transporting polypeptide 3A1 isolated from human brain.36
185210912009Whole genome association study identifies polymorphisms associated with QT prolongation during iloperidone treatment of schizophrenia.28
212784882011Expression and localization of the uptake transporters OATP2B1, OATP3A1 and OATP5A1 in non-malignant and malignant breast tissue.23
146319462003Molecular characterization of human and rat organic anion transporter OATP-D.16
214867662011The expression of thyroid hormone transporters in the human fetal cerebral cortex during early development and in N-Tera-2 neurodifferentiation.11
193309032009Gene by smoking interaction in hypertension: identification of a major quantitative trait locus on chromosome 15q for systolic blood pressure in Mexican-Americans.9
223770922012ANAPC1 and SLCO3A1 are associated with nicotine dependence: meta-analysis of genome-wide association studies.7
249457262014SLCO3A1, A novel crohn's disease-associated gene, regulates nf-κB activity and associates with intestinal perforation.2
263499912015Effect of DNA methylation profile on OATP3A1 and OATP4A1 transcript levels in colorectal cancer.1

Citation

Dessen P

SLCO3A1 (solute carrier organic anion transporter family member 3A1)

Atlas Genet Cytogenet Oncol Haematol. 2011-07-01

Online version: http://atlasgeneticsoncology.org/gene/52292/slco3a1