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SLCO4A1-AS1 (SLCO4A1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SLCO4A1-AS1
LocusID (NCBI) 100127888
Atlas_Id 73507
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62663027 and ends at 62666621 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLCO4A1-AS1   40537
Cards
Entrez_Gene (NCBI)SLCO4A1-AS1  100127888  SLCO4A1 antisense RNA 1
Aliases
GeneCards (Weizmann)SLCO4A1-AS1
Ensembl hg19 (Hinxton)ENSG00000232803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232803 [Gene_View]  chr20:62663027-62666621 [Contig_View]  SLCO4A1-AS1 [Vega]
ICGC DataPortalENSG00000232803
TCGA cBioPortalSLCO4A1-AS1
AceView (NCBI)SLCO4A1-AS1
Genatlas (Paris)SLCO4A1-AS1
WikiGenes100127888
SOURCE (Princeton)SLCO4A1-AS1
Genetics Home Reference (NIH)SLCO4A1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SLCO4A1-AS1  -     chr20:62663027-62666621 -  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLCO4A1-AS1  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblSLCO4A1-AS1 - 20q13.33 [CytoView hg19]  SLCO4A1-AS1 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBISLCO4A1-AS1 [Mapview hg19]  SLCO4A1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC025345 BU741282
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLCO4A1-AS1
Cluster EST : UnigeneHs.671273 [ NCBI ]
CGAP (NCI)Hs.671273
Alternative Splicing GalleryENSG00000232803
Gene ExpressionSLCO4A1-AS1 [ NCBI-GEO ]   SLCO4A1-AS1 [ EBI - ARRAY_EXPRESS ]   SLCO4A1-AS1 [ SEEK ]   SLCO4A1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLCO4A1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100127888
GTEX Portal (Tissue expression)SLCO4A1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLCO4A1-AS1
DMDM Disease mutations100127888
Blocks (Seattle)SLCO4A1-AS1
Human Protein AtlasENSG00000232803
IPIIPI00152084   
Protein Interaction databases
FunCoupENSG00000232803
BioGRIDSLCO4A1-AS1
STRING (EMBL)SLCO4A1-AS1
ZODIACSLCO4A1-AS1
Ontologies - Pathways
Huge Navigator SLCO4A1-AS1 [HugePedia]
snp3D : Map Gene to Disease100127888
BioCentury BCIQSLCO4A1-AS1
ClinGenSLCO4A1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100127888
Clinical trialSLCO4A1-AS1
Miscellaneous
canSAR (ICR)SLCO4A1-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLCO4A1-AS1
EVEXSLCO4A1-AS1
GoPubMedSLCO4A1-AS1
iHOPSLCO4A1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:53:53 CEST 2017

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