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SLED1 (proteoglycan 3 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643036
Atlas_Id 73510
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 185719451 and ends at 185720200 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)SLED1  643036  proteoglycan 3 pseudogene
Aliases
GeneCards (Weizmann)SLED1
Ensembl hg19 (Hinxton) [Gene_View]  chr4:185719451-185720200 [Contig_View]  SLED1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:185719451-185720200 [Contig_View]  SLED1 [Vega]
TCGA cBioPortalSLED1
AceView (NCBI)SLED1
Genatlas (Paris)SLED1
WikiGenes643036
SOURCE (Princeton)SLED1
Genetics Home Reference (NIH)SLED1
Genomic and cartography
GoldenPath hg19 (UCSC)SLED1  -     chr4:185719451-185720200 -  4q35.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SLED1  -     4q35.1   [Description]    (hg38-Dec_2013)
EnsemblSLED1 - 4q35.1 [CytoView hg19]  SLED1 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBISLED1 [Mapview hg19]  SLED1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY358224 BR000409
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)SLED1
Cluster EST : UnigeneHs.689630 [ NCBI ]
CGAP (NCI)Hs.689630
Gene ExpressionSLED1 [ NCBI-GEO ]   SLED1 [ EBI - ARRAY_EXPRESS ]   SLED1 [ SEEK ]   SLED1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLED1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643036
GTEX Portal (Tissue expression)SLED1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLED1
DMDM Disease mutations643036
Blocks (Seattle)SLED1
IPIIPI00432706   
Protein Interaction databases
BioGRIDSLED1
STRING (EMBL)SLED1
ZODIACSLED1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643036
BioCentury BCIQSLED1
ClinGenSLED1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643036
Clinical trialSLED1
Miscellaneous
canSAR (ICR)SLED1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLED1
EVEXSLED1
GoPubMedSLED1
iHOPSLED1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:44:00 CET 2017

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