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SLFNL1-AS1 (SLFNL1 antisense RNA 1)

Identity

Alias_namesSLFNL1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SLFNL1-AS1
LocusID (NCBI) 100507178
Atlas_Id 73515
Location 1p34.2  [Link to chromosome band 1p34]
Location_base_pair Starts at 41014590 and ends at 41043890 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLFNL1-AS1   44126
Cards
Entrez_Gene (NCBI)SLFNL1-AS1  100507178  SLFNL1 antisense RNA 1
Aliases
GeneCards (Weizmann)SLFNL1-AS1
Ensembl hg19 (Hinxton)ENSG00000281207 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281207 [Gene_View]  chr1:41014590-41043890 [Contig_View]  SLFNL1-AS1 [Vega]
ICGC DataPortalENSG00000281207
TCGA cBioPortalSLFNL1-AS1
AceView (NCBI)SLFNL1-AS1
Genatlas (Paris)SLFNL1-AS1
WikiGenes100507178
SOURCE (Princeton)SLFNL1-AS1
Genetics Home Reference (NIH)SLFNL1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SLFNL1-AS1  -     chr1:41014590-41043890 +  1p34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLFNL1-AS1  -     1p34.2   [Description]    (hg19-Feb_2009)
EnsemblSLFNL1-AS1 - 1p34.2 [CytoView hg19]  SLFNL1-AS1 - 1p34.2 [CytoView hg38]
Mapping of homologs : NCBISLFNL1-AS1 [Mapview hg19]  SLFNL1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL157461 BC023272
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLFNL1-AS1
Cluster EST : UnigeneHs.660056 [ NCBI ]
CGAP (NCI)Hs.660056
Alternative Splicing GalleryENSG00000281207
Gene ExpressionSLFNL1-AS1 [ NCBI-GEO ]   SLFNL1-AS1 [ EBI - ARRAY_EXPRESS ]   SLFNL1-AS1 [ SEEK ]   SLFNL1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLFNL1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507178
GTEX Portal (Tissue expression)SLFNL1-AS1
Human Protein AtlasENSG00000281207-SLFNL1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLFNL1-AS1
DMDM Disease mutations100507178
Blocks (Seattle)SLFNL1-AS1
Human Protein Atlas [tissue]ENSG00000281207-SLFNL1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000281207
BioGRIDSLFNL1-AS1
STRING (EMBL)SLFNL1-AS1
ZODIACSLFNL1-AS1
Ontologies - Pathways
Huge Navigator SLFNL1-AS1 [HugePedia]
snp3D : Map Gene to Disease100507178
BioCentury BCIQSLFNL1-AS1
ClinGenSLFNL1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507178
Clinical trialSLFNL1-AS1
Miscellaneous
canSAR (ICR)SLFNL1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLFNL1-AS1
EVEXSLFNL1-AS1
GoPubMedSLFNL1-AS1
iHOPSLFNL1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:12:57 CET 2017

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