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SLK (STE20 like kinase)

Identity

Alias (NCBI)LOSK
STK2
bA16H23.1
se20-9
HGNC (Hugo) SLK
HGNC Alias symbSTK2
se20-9
KIAA0204
HGNC Previous nameSNF1 (sucrose nonfermenting, yeast, homolog)-like kinase, SNF1 sucrose nonfermenting like kinase (yeast)
 STE20-like kinase (yeast)
 STE20-like kinase
LocusID (NCBI) 9748
Atlas_Id 42329
Location 10q24.33  [Link to chromosome band 10q24]
Location_base_pair Starts at 103967140 and ends at 104029233 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SLK (10q24.33) / DNAH5 (5p15.2)SLK (10q24.33) / ZFHX3 (16q22.2)SLK 10q24.33 / ZFHX3 16q22.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SLK   11088
Cards
Entrez_Gene (NCBI)SLK    STE20 like kinase
AliasesLOSK; STK2; bA16H23.1; se20-9
GeneCards (Weizmann)SLK
Ensembl hg19 (Hinxton)ENSG00000065613 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000065613 [Gene_View]  ENSG00000065613 [Sequence]  chr10:103967140-104029233 [Contig_View]  SLK [Vega]
ICGC DataPortalENSG00000065613
TCGA cBioPortalSLK
AceView (NCBI)SLK
Genatlas (Paris)SLK
SOURCE (Princeton)SLK
Genetics Home Reference (NIH)SLK
Genomic and cartography
GoldenPath hg38 (UCSC)SLK  -     chr10:103967140-104029233 +  10q24.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLK  -     10q24.33   [Description]    (hg19-Feb_2009)
GoldenPathSLK - 10q24.33 [CytoView hg19]  SLK - 10q24.33 [CytoView hg38]
ImmunoBaseENSG00000065613
Genome Data Viewer NCBISLK [Mapview hg19]  
OMIM616563   
Gene and transcription
Genbank (Entrez)AB002804 AF273048 AK302855 AK307389 BC008697
RefSeq transcript (Entrez)NM_001304743 NM_014720
Consensus coding sequences : CCDS (NCBI)SLK
Gene ExpressionSLK [ NCBI-GEO ]   SLK [ EBI - ARRAY_EXPRESS ]   SLK [ SEEK ]   SLK [ MEM ]
Gene Expression Viewer (FireBrowse)SLK [ Firebrowse - Broad ]
GenevisibleExpression of SLK in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9748
GTEX Portal (Tissue expression)SLK
Human Protein AtlasENSG00000065613-SLK [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLK
Human Protein Atlas [tissue]ENSG00000065613-SLK [tissue]
HPRD11585
Protein Interaction databases
BioGRIDSLK
STRING (EMBL)SLK
ZODIACSLK
Ontologies - Pathways
Litterature
PubMed57 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSLK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:32:05 CEST 2021

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