SMARCD1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1)

2003-05-01  

Identity

HGNC
LOCATION
12q13.12
LOCUSID
ALIAS
BAF60A,CRACD1,CSS11,Rsc6p
FUSION GENES

Other Information

Locus ID:

NCBI: 6602
MIM: 601735
HGNC: 11106
Ensembl: ENSG00000066117

Variants:

dbSNP: 6602
ClinVar: 6602
TCGA: ENSG00000066117
COSMIC: SMARCD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000066117ENST00000381513Q96GM5
ENSG00000066117ENST00000394963Q96GM5
ENSG00000066117ENST00000548573F8VRQ4
ENSG00000066117ENST00000549274H0YHV1
ENSG00000066117ENST00000550477F8VUB0
ENSG00000066117ENST00000551497F8VW95
ENSG00000066117ENST00000551966F8VZ70

Expression (GTEx)

0
10
20
30
40
50
60

Pathways

PathwaySourceExternal ID
Chromatin organizationREACTOMER-HSA-4839726
Chromatin modifying enzymesREACTOMER-HSA-3247509
RMTs methylate histone argininesREACTOMER-HSA-3214858

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
374019392023Integrated analysis reveals SMARCD1 is a potential biomarker and therapeutic target in skin cutaneous melanoma.0
377688252023Myeloid BAF60a deficiency alters metabolic homeostasis and exacerbates atherosclerosis.0
374019392023Integrated analysis reveals SMARCD1 is a potential biomarker and therapeutic target in skin cutaneous melanoma.0
377688252023Myeloid BAF60a deficiency alters metabolic homeostasis and exacerbates atherosclerosis.0
351484612022microRNA-99a-5p induces cellular senescence in gemcitabine-resistant bladder cancer by targeting SMARCD1.5
351582022022Assembly and interaction of core subunits of BAF complexes and crystal study of the SMARCC1/SMARCE1 binary complex.2
351484612022microRNA-99a-5p induces cellular senescence in gemcitabine-resistant bladder cancer by targeting SMARCD1.5
351582022022Assembly and interaction of core subunits of BAF complexes and crystal study of the SMARCC1/SMARCE1 binary complex.2
331681862021NMR spectroscopy uncovers direct interaction between BAF60A and p53.1
331901702021Smarcd1 Inhibits the Malignant Phenotypes of Human Glioblastoma Cells via Crosstalk with Notch1.0
331681862021NMR spectroscopy uncovers direct interaction between BAF60A and p53.1
331901702021Smarcd1 Inhibits the Malignant Phenotypes of Human Glioblastoma Cells via Crosstalk with Notch1.0
316377142020SMARCD1 is a transcriptional target of specific non-hotspot mutant p53 forms.2
319922922020Expression of SMARCD1 interacts with age in association with asthma control on inhaled corticosteroid therapy.4
322994272020hsa-miR-100-5p, an overexpressed miRNA in human ovarian endometriotic stromal cells, promotes invasion through attenuation of SMARCD1 expression.11

Citation

Dessen P

SMARCD1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1)

Atlas Genet Cytogenet Oncol Haematol. 2003-05-01

Online version: http://atlasgeneticsoncology.org/gene/42336/smarcd1