SMCO2 (single-pass membrane protein with coiled-coil domains 2)

2014-11-01  

Identity

HGNC
SMCO2
LOCATION
12p11.23
LOCUSID
341346
ALIAS
C12orf70
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 341346
HGNC: 34448
Ensembl: ENSG00000165935

Variants:

dbSNP: 341346
ClinVar: 341346
TCGA: ENSG00000165935
COSMIC: SMCO2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000165935ENST00000298876J3KNC3
ENSG00000165935ENST00000416383A6NFE2
ENSG00000165935ENST00000535986A6NFE2

Expression (GTEx)

0
1
2
3
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

Citation

Dessen P

SMCO2 (single-pass membrane protein with coiled-coil domains 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73542/smco2