Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SMG1P7 (SMG1 pseudogene 7)

Identity

Alias_namesSMG1 pseudogene 7
Other alias-
HGNC (Hugo) SMG1P7
LocusID (NCBI) 100506060
Atlas_Id 73553
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 70253484 and ends at 70259936 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SMG1P7   49864
Cards
Entrez_Gene (NCBI)SMG1P7  100506060  SMG1 pseudogene 7
Aliases
GeneCards (Weizmann)SMG1P7
Ensembl hg19 (Hinxton)ENSG00000261556 [Gene_View]  chr16:70253484-70259936 [Contig_View]  SMG1P7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000261556 [Gene_View]  chr16:70253484-70259936 [Contig_View]  SMG1P7 [Vega]
ICGC DataPortalENSG00000261556
TCGA cBioPortalSMG1P7
AceView (NCBI)SMG1P7
Genatlas (Paris)SMG1P7
WikiGenes100506060
SOURCE (Princeton)SMG1P7
Genetics Home Reference (NIH)SMG1P7
Genomic and cartography
GoldenPath hg19 (UCSC)SMG1P7  -     chr16:70253484-70259936 -  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SMG1P7  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblSMG1P7 - 16q22.1 [CytoView hg19]  SMG1P7 - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBISMG1P7 [Mapview hg19]  SMG1P7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128245 AK308867
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)SMG1P7
Cluster EST : UnigeneHs.723071 [ NCBI ]
CGAP (NCI)Hs.723071
Alternative Splicing GalleryENSG00000261556
Gene ExpressionSMG1P7 [ NCBI-GEO ]   SMG1P7 [ EBI - ARRAY_EXPRESS ]   SMG1P7 [ SEEK ]   SMG1P7 [ MEM ]
Gene Expression Viewer (FireBrowse)SMG1P7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506060
GTEX Portal (Tissue expression)SMG1P7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMG1P7
DMDM Disease mutations100506060
Blocks (Seattle)SMG1P7
Human Protein AtlasENSG00000261556
IPIIPI00982861   
Protein Interaction databases
FunCoupENSG00000261556
BioGRIDSMG1P7
STRING (EMBL)SMG1P7
ZODIACSMG1P7
Ontologies - Pathways
Huge Navigator SMG1P7 [HugePedia]
snp3D : Map Gene to Disease100506060
BioCentury BCIQSMG1P7
ClinGenSMG1P7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506060
Clinical trialSMG1P7
Miscellaneous
canSAR (ICR)SMG1P7 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMG1P7
EVEXSMG1P7
GoPubMedSMG1P7
iHOPSMG1P7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:44:09 CET 2017

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