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SMILR (smooth muscle induced lncRNA, enhancer of proliferation)

Identity

Other alias-
HGNC (Hugo) SMILR
LocusID (NCBI) 105375734
Atlas_Id 56794
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 122414327 and ends at 122568644 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SMILR   51825
Cards
Entrez_Gene (NCBI)SMILR  105375734  smooth muscle induced lncRNA, enhancer of proliferation
Aliases
GeneCards (Weizmann)SMILR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr8:122414327-122568644 [Contig_View]  SMILR [Vega]
TCGA cBioPortalSMILR
AceView (NCBI)SMILR
Genatlas (Paris)SMILR
WikiGenes105375734
SOURCE (Princeton)SMILR
Genetics Home Reference (NIH)SMILR
Genomic and cartography
GoldenPath hg38 (UCSC)SMILR  -     chr8:122414327-122568644 -  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMILR  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblSMILR - 8q24.13 [CytoView hg19]  SMILR - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBISMILR [Mapview hg19]  SMILR [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA597759 DA599964
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SMILR
Cluster EST : UnigeneHs.628341 [ NCBI ]
CGAP (NCI)Hs.628341
Gene ExpressionSMILR [ NCBI-GEO ]   SMILR [ EBI - ARRAY_EXPRESS ]   SMILR [ SEEK ]   SMILR [ MEM ]
Gene Expression Viewer (FireBrowse)SMILR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375734
GTEX Portal (Tissue expression)SMILR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMILR
DMDM Disease mutations105375734
Blocks (Seattle)SMILR
Protein Interaction databases
BioGRIDSMILR
STRING (EMBL)SMILR
ZODIACSMILR
Ontologies - Pathways
Huge Navigator SMILR [HugePedia]
snp3D : Map Gene to Disease105375734
BioCentury BCIQSMILR
ClinGenSMILR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375734
Clinical trialSMILR
Miscellaneous
canSAR (ICR)SMILR (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMILR
EVEXSMILR
GoPubMedSMILR
iHOPSMILR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 22 16:50:47 CEST 2018

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