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SMIM10L2A (small integral membrane protein 10 like 2A)

Identity

Alias_namesNCRNA00086
LINC00086
non-protein coding RNA 86
long intergenic non-protein coding RNA 86
Alias_symbol (synonym)MGC39606
LED
Other alias
HGNC (Hugo) SMIM10L2A
LocusID (NCBI) 399668
Atlas_Id 76733
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 134555868 and ends at 134559682 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SMIM10L2A   34499
Cards
Entrez_Gene (NCBI)SMIM10L2A  399668  small integral membrane protein 10 like 2A
AliasesLED; LINC00086; NCRNA00086
GeneCards (Weizmann)SMIM10L2A
Ensembl hg19 (Hinxton) [Gene_View]  chrX:134555868-134559682 [Contig_View]  SMIM10L2A [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:134555868-134559682 [Contig_View]  SMIM10L2A [Vega]
TCGA cBioPortalSMIM10L2A
AceView (NCBI)SMIM10L2A
Genatlas (Paris)SMIM10L2A
WikiGenes399668
SOURCE (Princeton)SMIM10L2A
Genetics Home Reference (NIH)SMIM10L2A
Genomic and cartography
GoldenPath hg19 (UCSC)SMIM10L2A  -     chrX:134555868-134559682 +  Xq26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SMIM10L2A  -     Xq26.3   [Description]    (hg38-Dec_2013)
EnsemblSMIM10L2A - Xq26.3 [CytoView hg19]  SMIM10L2A - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBISMIM10L2A [Mapview hg19]  SMIM10L2A [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030620 BC051704 CA389121 CN430413 DR001138
RefSeq transcript (Entrez)NM_203306
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011786 NW_004929446
Consensus coding sequences : CCDS (NCBI)SMIM10L2A
Cluster EST : UnigeneHs.374414 [ NCBI ]
CGAP (NCI)Hs.374414
Gene ExpressionSMIM10L2A [ NCBI-GEO ]   SMIM10L2A [ EBI - ARRAY_EXPRESS ]   SMIM10L2A [ SEEK ]   SMIM10L2A [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM10L2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399668
GTEX Portal (Tissue expression)SMIM10L2A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM10L2A
DMDM Disease mutations399668
Blocks (Seattle)SMIM10L2A
HPRD14610
IPIIPI00328812   
Protein Interaction databases
BioGRIDSMIM10L2A
STRING (EMBL)SMIM10L2A
ZODIACSMIM10L2A
Ontologies - Pathways
Huge Navigator SMIM10L2A [HugePedia]
snp3D : Map Gene to Disease399668
BioCentury BCIQSMIM10L2A
ClinGenSMIM10L2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399668
Chemical/Pharm GKB GenePA164723613
Clinical trialSMIM10L2A
Miscellaneous
canSAR (ICR)SMIM10L2A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMIM10L2A
EVEXSMIM10L2A
GoPubMedSMIM10L2A
iHOPSMIM10L2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:44:11 CET 2017

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