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SMIM10L2B-AS1 (SMIM10L2B antisense RNA 1)

Identity

Alias_symbol (synonym)ENST00000453528
Other alias-
HGNC (Hugo) SMIM10L2B-AS1
LocusID (NCBI) 100287728
Atlas_Id 79659
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 135120621 and ends at 135123601 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SMIM10L2B-AS1   53137
Cards
Entrez_Gene (NCBI)SMIM10L2B-AS1  100287728  SMIM10L2B antisense RNA 1
Aliases
GeneCards (Weizmann)SMIM10L2B-AS1
Ensembl hg19 (Hinxton)ENSG00000228372 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228372 [Gene_View]  chrX:135120621-135123601 [Contig_View]  SMIM10L2B-AS1 [Vega]
ICGC DataPortalENSG00000228372
TCGA cBioPortalSMIM10L2B-AS1
AceView (NCBI)SMIM10L2B-AS1
Genatlas (Paris)SMIM10L2B-AS1
WikiGenes100287728
SOURCE (Princeton)SMIM10L2B-AS1
Genetics Home Reference (NIH)SMIM10L2B-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SMIM10L2B-AS1  -     chrX:135120621-135123601 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMIM10L2B-AS1  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblSMIM10L2B-AS1 - Xq26.3 [CytoView hg19]  SMIM10L2B-AS1 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBISMIM10L2B-AS1 [Mapview hg19]  SMIM10L2B-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW450913 BC061642
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SMIM10L2B-AS1
Cluster EST : UnigeneHs.371717 [ NCBI ]
CGAP (NCI)Hs.371717
Alternative Splicing GalleryENSG00000228372
Gene ExpressionSMIM10L2B-AS1 [ NCBI-GEO ]   SMIM10L2B-AS1 [ EBI - ARRAY_EXPRESS ]   SMIM10L2B-AS1 [ SEEK ]   SMIM10L2B-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM10L2B-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287728
GTEX Portal (Tissue expression)SMIM10L2B-AS1
Human Protein AtlasENSG00000228372-SMIM10L2B-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM10L2B-AS1
DMDM Disease mutations100287728
Blocks (Seattle)SMIM10L2B-AS1
Human Protein Atlas [tissue]ENSG00000228372-SMIM10L2B-AS1 [tissue]
IPIIPI00651678   
Protein Interaction databases
FunCoupENSG00000228372
BioGRIDSMIM10L2B-AS1
STRING (EMBL)SMIM10L2B-AS1
ZODIACSMIM10L2B-AS1
Ontologies - Pathways
Huge Navigator SMIM10L2B-AS1 [HugePedia]
snp3D : Map Gene to Disease100287728
BioCentury BCIQSMIM10L2B-AS1
ClinGenSMIM10L2B-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287728
Clinical trialSMIM10L2B-AS1
Miscellaneous
canSAR (ICR)SMIM10L2B-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMIM10L2B-AS1
EVEXSMIM10L2B-AS1
GoPubMedSMIM10L2B-AS1
iHOPSMIM10L2B-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:00:36 CET 2017

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