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SMIM11A (small integral membrane protein 11A)

Identity

Alias_namesC21orf51
FAM165B
SMIM11
chromosome 21 open reading frame 51
family with sequence similarity 165, member B
small integral membrane protein 11
Other alias
HGNC (Hugo) SMIM11A
LocusID (NCBI) 54065
Atlas_Id 77772
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 35747749 and ends at 35761452 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
SMIM11A (21q22.11) / TOM1L1 (17q22)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SMIM11A   1293
Cards
Entrez_Gene (NCBI)SMIM11A  54065  small integral membrane protein 11A
AliasesC21orf51; FAM165B; SMIM11
GeneCards (Weizmann)SMIM11A
Ensembl hg19 (Hinxton)ENSG00000205670 [Gene_View]  chr21:35747749-35761452 [Contig_View]  SMIM11A [Vega]
Ensembl hg38 (Hinxton)ENSG00000205670 [Gene_View]  chr21:35747749-35761452 [Contig_View]  SMIM11A [Vega]
ICGC DataPortalENSG00000205670
TCGA cBioPortalSMIM11A
AceView (NCBI)SMIM11A
Genatlas (Paris)SMIM11A
WikiGenes54065
SOURCE (Princeton)SMIM11A
Genetics Home Reference (NIH)SMIM11A
Genomic and cartography
GoldenPath hg19 (UCSC)SMIM11A  -     chr21:35747749-35761452 +  21q22.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SMIM11A  -     21q22.11   [Description]    (hg38-Dec_2013)
EnsemblSMIM11A - 21q22.11 [CytoView hg19]  SMIM11A - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBISMIM11A [Mapview hg19]  SMIM11A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_058182
RefSeq genomic (Entrez)NC_000021 NT_011512
Consensus coding sequences : CCDS (NCBI)SMIM11A
Cluster EST : UnigeneHs.656195 [ NCBI ]
CGAP (NCI)Hs.656195
Alternative Splicing GalleryENSG00000205670
Gene ExpressionSMIM11A [ NCBI-GEO ]   SMIM11A [ EBI - ARRAY_EXPRESS ]   SMIM11A [ SEEK ]   SMIM11A [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM11A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54065
GTEX Portal (Tissue expression)SMIM11A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM11A
DMDM Disease mutations54065
Blocks (Seattle)SMIM11A
Human Protein AtlasENSG00000205670
HPRD10751
IPIIPI00067916   IPI00873824   IPI00152478   
Protein Interaction databases
FunCoupENSG00000205670
BioGRIDSMIM11A
STRING (EMBL)SMIM11A
ZODIACSMIM11A
Ontologies - Pathways
Huge Navigator SMIM11A [HugePedia]
snp3D : Map Gene to Disease54065
BioCentury BCIQSMIM11A
ClinGenSMIM11A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54065
Chemical/Pharm GKB GenePA162387008
Clinical trialSMIM11A
Miscellaneous
canSAR (ICR)SMIM11A (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMIM11A
EVEXSMIM11A
GoPubMedSMIM11A
iHOPSMIM11A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:44:12 CET 2017

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