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SMIM2-AS1 (SMIM2 antisense RNA 1)

Identity

Alias_namesC13orf44-AS1
C13orf44 antisense RNA 1 (non-protein coding)
SMIM2 antisense RNA 1 (non-protein coding)
Other aliasC3orf81-AS1
HGNC (Hugo) SMIM2-AS1
LocusID (NCBI) 101929212
Atlas_Id 73576
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 44142328 and ends at 44154075 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SMIM2-AS1   42674
Cards
Entrez_Gene (NCBI)SMIM2-AS1  101929212  SMIM2 antisense RNA 1
AliasesC13orf44-AS1; C3orf81-AS1
GeneCards (Weizmann)SMIM2-AS1
Ensembl hg19 (Hinxton)ENSG00000227258 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227258 [Gene_View]  chr13:44142328-44154075 [Contig_View]  SMIM2-AS1 [Vega]
ICGC DataPortalENSG00000227258
TCGA cBioPortalSMIM2-AS1
AceView (NCBI)SMIM2-AS1
Genatlas (Paris)SMIM2-AS1
WikiGenes101929212
SOURCE (Princeton)SMIM2-AS1
Genetics Home Reference (NIH)SMIM2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SMIM2-AS1  -     chr13:44142328-44154075 +  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMIM2-AS1  -     13q14.11   [Description]    (hg19-Feb_2009)
EnsemblSMIM2-AS1 - 13q14.11 [CytoView hg19]  SMIM2-AS1 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBISMIM2-AS1 [Mapview hg19]  SMIM2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF510139 BF510376 BX100376 DB036693
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SMIM2-AS1
Cluster EST : UnigeneHs.534877 [ NCBI ]
CGAP (NCI)Hs.534877
Alternative Splicing GalleryENSG00000227258
Gene ExpressionSMIM2-AS1 [ NCBI-GEO ]   SMIM2-AS1 [ EBI - ARRAY_EXPRESS ]   SMIM2-AS1 [ SEEK ]   SMIM2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929212
GTEX Portal (Tissue expression)SMIM2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM2-AS1
DMDM Disease mutations101929212
Blocks (Seattle)SMIM2-AS1
Human Protein AtlasENSG00000227258
Protein Interaction databases
FunCoupENSG00000227258
BioGRIDSMIM2-AS1
STRING (EMBL)SMIM2-AS1
ZODIACSMIM2-AS1
Ontologies - Pathways
Huge Navigator SMIM2-AS1 [HugePedia]
snp3D : Map Gene to Disease101929212
BioCentury BCIQSMIM2-AS1
ClinGenSMIM2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929212
Clinical trialSMIM2-AS1
Miscellaneous
canSAR (ICR)SMIM2-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMIM2-AS1
EVEXSMIM2-AS1
GoPubMedSMIM2-AS1
iHOPSMIM2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:38:32 CEST 2017

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