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SMIM26 (small integral membrane protein 26)

Identity

Alias_namesLINC00493
long intergenic non-protein coding RNA 493
Alias_symbol (synonym)LOC388789
Other alias
HGNC (Hugo) SMIM26
LocusID (NCBI) 388789
Atlas_Id 79234
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 18567420 and ends at 18569611 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SMIM26   43430
Cards
Entrez_Gene (NCBI)SMIM26  388789  small integral membrane protein 26
AliasesLINC00493
GeneCards (Weizmann)SMIM26
Ensembl hg19 (Hinxton)ENSG00000232388 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232388 [Gene_View]  chr20:18567420-18569611 [Contig_View]  SMIM26 [Vega]
ICGC DataPortalENSG00000232388
TCGA cBioPortalSMIM26
AceView (NCBI)SMIM26
Genatlas (Paris)SMIM26
WikiGenes388789
SOURCE (Princeton)SMIM26
Genetics Home Reference (NIH)SMIM26
Genomic and cartography
GoldenPath hg38 (UCSC)SMIM26  -     chr20:18567420-18569611 +  20p11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMIM26  -     20p11.23   [Description]    (hg19-Feb_2009)
EnsemblSMIM26 - 20p11.23 [CytoView hg19]  SMIM26 - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBISMIM26 [Mapview hg19]  SMIM26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF147354 AK024594 BC015983 BC039422 BC092494
RefSeq transcript (Entrez)NM_001348957 NM_001348958
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SMIM26
Cluster EST : UnigeneHs.349092 [ NCBI ]
CGAP (NCI)Hs.349092
Alternative Splicing GalleryENSG00000232388
Gene ExpressionSMIM26 [ NCBI-GEO ]   SMIM26 [ EBI - ARRAY_EXPRESS ]   SMIM26 [ SEEK ]   SMIM26 [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388789
GTEX Portal (Tissue expression)SMIM26
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM26
DMDM Disease mutations388789
Blocks (Seattle)SMIM26
Human Protein AtlasENSG00000232388
IPIIPI00847596   
Protein Interaction databases
FunCoupENSG00000232388
BioGRIDSMIM26
STRING (EMBL)SMIM26
ZODIACSMIM26
Ontologies - Pathways
Huge Navigator SMIM26 [HugePedia]
snp3D : Map Gene to Disease388789
BioCentury BCIQSMIM26
ClinGenSMIM26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388789
Clinical trialSMIM26
Miscellaneous
canSAR (ICR)SMIM26 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMIM26
EVEXSMIM26
GoPubMedSMIM26
iHOPSMIM26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:38:32 CEST 2017

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