SMIM29 (small integral membrane protein 29)

2017-09-01  

Identity

HGNC
SMIM29
LOCATION
6p21.31
LOCUSID
221491
ALIAS
C6orf1,LBH

Other Information

Locus ID:

NCBI: 221491
MIM: 611419
HGNC: 1340
Ensembl: ENSG00000186577

Variants:

dbSNP: 221491
ClinVar: 221491
TCGA: ENSG00000186577
COSMIC: SMIM29

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000186577ENST00000394990Q86T20
ENSG00000186577ENST00000394990L8E8G6
ENSG00000186577ENST00000413013G8JLJ3
ENSG00000186577ENST00000468145Q86T20
ENSG00000186577ENST00000468145L8E8G6
ENSG00000186577ENST00000476320Q86T20
ENSG00000186577ENST00000481533Q86T20
ENSG00000186577ENST00000636500A0A2U3TZT1
ENSG00000186577ENST00000637920G8JLJ3

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.11

Citation

Dessen P

SMIM29 (small integral membrane protein 29)

Atlas Genet Cytogenet Oncol Haematol. 2017-09-01

Online version: http://atlasgeneticsoncology.org/gene/80255/smim29