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SMIM35 (small integral membrane protein 35)

Identity

Alias_namesTMPRSS4-AS1
TMPRSS4 antisense RNA 1 (non-protein coding)
TMPRSS4 antisense RNA 1
Other alias
HGNC (Hugo) SMIM35
LocusID (NCBI) 100526771
Atlas_Id 79522
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 118015772 and ends at 118086793 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SMIM35   44179
Cards
Entrez_Gene (NCBI)SMIM35  100526771  small integral membrane protein 35
AliasesTMPRSS4-AS1
GeneCards (Weizmann)SMIM35
Ensembl hg19 (Hinxton)ENSG00000255274 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255274 [Gene_View]  chr11:118015772-118086793 [Contig_View]  SMIM35 [Vega]
ICGC DataPortalENSG00000255274
TCGA cBioPortalSMIM35
AceView (NCBI)SMIM35
Genatlas (Paris)SMIM35
WikiGenes100526771
SOURCE (Princeton)SMIM35
Genetics Home Reference (NIH)SMIM35
Genomic and cartography
GoldenPath hg38 (UCSC)SMIM35  -     chr11:118015772-118086793 -  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMIM35  -     11q23.3   [Description]    (hg19-Feb_2009)
EnsemblSMIM35 - 11q23.3 [CytoView hg19]  SMIM35 - 11q23.3 [CytoView hg38]
Mapping of homologs : NCBISMIM35 [Mapview hg19]  SMIM35 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB231754 AB231755 AB231756 AB231757 AB231758
RefSeq transcript (Entrez)NM_001354434
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SMIM35
Cluster EST : UnigeneHs.627426 [ NCBI ]
CGAP (NCI)Hs.627426
Alternative Splicing GalleryENSG00000255274
Gene ExpressionSMIM35 [ NCBI-GEO ]   SMIM35 [ EBI - ARRAY_EXPRESS ]   SMIM35 [ SEEK ]   SMIM35 [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526771
GTEX Portal (Tissue expression)SMIM35
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM35
DMDM Disease mutations100526771
Blocks (Seattle)SMIM35
Human Protein AtlasENSG00000255274
Protein Interaction databases
FunCoupENSG00000255274
BioGRIDSMIM35
STRING (EMBL)SMIM35
ZODIACSMIM35
Ontologies - Pathways
Huge Navigator SMIM35 [HugePedia]
snp3D : Map Gene to Disease100526771
BioCentury BCIQSMIM35
ClinGenSMIM35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526771
Clinical trialSMIM35
Miscellaneous
canSAR (ICR)SMIM35 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSMIM35
EVEXSMIM35
GoPubMedSMIM35
iHOPSMIM35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:38:33 CEST 2017

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