Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SMIM35 (small integral membrane protein 35)


HGNC (Hugo) SMIM35
HGNC Previous nameTMPRSS4-AS1
HGNC Previous nameTMPRSS4 antisense RNA 1 (non-protein coding)
 TMPRSS4 antisense RNA 1
LocusID (NCBI) 100526771
Atlas_Id 79522
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 118013748 and ends at 118086963 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)SMIM35   44179
Entrez_Gene (NCBI)SMIM35    small integral membrane protein 35
GeneCards (Weizmann)SMIM35
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:118013748-118086963 [Contig_View]  SMIM35 [Vega]
TCGA cBioPortalSMIM35
AceView (NCBI)SMIM35
Genatlas (Paris)SMIM35
SOURCE (Princeton)SMIM35
Genetics Home Reference (NIH)SMIM35
Genomic and cartography
GoldenPath hg38 (UCSC)SMIM35  -     chr11:118013748-118086963 -  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMIM35  -     11q23.3   [Description]    (hg19-Feb_2009)
GoldenPathSMIM35 - 11q23.3 [CytoView hg19]  SMIM35 - 11q23.3 [CytoView hg38]
Genome Data Viewer NCBISMIM35 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB231754 AB231755 AB231756 AB231757 AB231758
RefSeq transcript (Entrez)NM_001354434 NM_001394164 NM_001394165 NM_001394166
Consensus coding sequences : CCDS (NCBI)SMIM35
Gene ExpressionSMIM35 [ NCBI-GEO ]   SMIM35 [ EBI - ARRAY_EXPRESS ]   SMIM35 [ SEEK ]   SMIM35 [ MEM ]
Gene Expression Viewer (FireBrowse)SMIM35 [ Firebrowse - Broad ]
GenevisibleExpression of SMIM35 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100526771
GTEX Portal (Tissue expression)SMIM35
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMIM35
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:21:32 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us