Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SMOX (spermine oxidase)

Identity

Alias (NCBI)C20orf16
PAO
PAO-1
PAO1
PAOH
PAOH1
SMO
HGNC (Hugo) SMOX
HGNC Alias symbFLJ20746
dJ779E11.1
PAO
PAOh1
MGC1010
SMO
HGNC Previous nameC20orf16
HGNC Previous namechromosome 20 open reading frame 16
LocusID (NCBI) 54498
Atlas_Id 46474
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 4148828 and ends at 4187727 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SMOX (20p13) / EIF3D (22q12.3)SMOX (20p13) / SMOX (20p13)SMOX (20p13) / URM1 (9q34.11)
SMOX 20p13 / EIF3D 22q12.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SMOX   15862
Cards
Entrez_Gene (NCBI)SMOX    spermine oxidase
AliasesC20orf16; PAO; PAO-1; PAO1; 
PAOH; PAOH1; SMO
GeneCards (Weizmann)SMOX
Ensembl hg19 (Hinxton)ENSG00000088826 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000088826 [Gene_View]  ENSG00000088826 [Sequence]  chr20:4148828-4187727 [Contig_View]  SMOX [Vega]
ICGC DataPortalENSG00000088826
TCGA cBioPortalSMOX
AceView (NCBI)SMOX
Genatlas (Paris)SMOX
SOURCE (Princeton)SMOX
Genetics Home Reference (NIH)SMOX
Genomic and cartography
GoldenPath hg38 (UCSC)SMOX  -     chr20:4148828-4187727 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SMOX  -     20p13   [Description]    (hg19-Feb_2009)
GoldenPathSMOX - 20p13 [CytoView hg19]  SMOX - 20p13 [CytoView hg38]
ImmunoBaseENSG00000088826
Genome Data Viewer NCBISMOX [Mapview hg19]  
OMIM615854   
Gene and transcription
Genbank (Entrez)AF519179 AK000753 AK025938 AK127286 AK293485
RefSeq transcript (Entrez)NM_001270691 NM_175839 NM_175840 NM_175841 NM_175842
Consensus coding sequences : CCDS (NCBI)SMOX
Gene ExpressionSMOX [ NCBI-GEO ]   SMOX [ EBI - ARRAY_EXPRESS ]   SMOX [ SEEK ]   SMOX [ MEM ]
Gene Expression Viewer (FireBrowse)SMOX [ Firebrowse - Broad ]
GenevisibleExpression of SMOX in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54498
GTEX Portal (Tissue expression)SMOX
Human Protein AtlasENSG00000088826-SMOX [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SMOX
Human Protein Atlas [tissue]ENSG00000088826-SMOX [tissue]
HPRD11587
Protein Interaction databases
BioGRIDSMOX
STRING (EMBL)SMOX
ZODIACSMOX
Ontologies - Pathways
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSMOX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:32:15 CEST 2021

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