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SNAP25-AS1 (SNAP25 antisense RNA 1)

Identity

Alias_namesSNAP25 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SNAP25-AS1
LocusID (NCBI) 100131208
Atlas_Id 73598
Location 20p12.2  [Link to chromosome band 20p12]
Location_base_pair Starts at 10004460 and ends at 10200154 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNAP25-AS1   44312
Cards
Entrez_Gene (NCBI)SNAP25-AS1  100131208  SNAP25 antisense RNA 1
Aliases
GeneCards (Weizmann)SNAP25-AS1
Ensembl hg19 (Hinxton)ENSG00000227906 [Gene_View]  chr20:10004460-10200154 [Contig_View]  SNAP25-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000227906 [Gene_View]  chr20:10004460-10200154 [Contig_View]  SNAP25-AS1 [Vega]
ICGC DataPortalENSG00000227906
TCGA cBioPortalSNAP25-AS1
AceView (NCBI)SNAP25-AS1
Genatlas (Paris)SNAP25-AS1
WikiGenes100131208
SOURCE (Princeton)SNAP25-AS1
Genetics Home Reference (NIH)SNAP25-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SNAP25-AS1  -     chr20:10004460-10200154 -  20p12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNAP25-AS1  -     20p12.2   [Description]    (hg38-Dec_2013)
EnsemblSNAP25-AS1 - 20p12.2 [CytoView hg19]  SNAP25-AS1 - 20p12.2 [CytoView hg38]
Mapping of homologs : NCBISNAP25-AS1 [Mapview hg19]  SNAP25-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124961 BF244758 DA318406 HG511173 HG511174
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)SNAP25-AS1
Cluster EST : UnigeneHs.658178 [ NCBI ]
CGAP (NCI)Hs.658178
Alternative Splicing GalleryENSG00000227906
Gene ExpressionSNAP25-AS1 [ NCBI-GEO ]   SNAP25-AS1 [ EBI - ARRAY_EXPRESS ]   SNAP25-AS1 [ SEEK ]   SNAP25-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SNAP25-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131208
GTEX Portal (Tissue expression)SNAP25-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNAP25-AS1
DMDM Disease mutations100131208
Blocks (Seattle)SNAP25-AS1
Human Protein AtlasENSG00000227906
Protein Interaction databases
FunCoupENSG00000227906
BioGRIDSNAP25-AS1
STRING (EMBL)SNAP25-AS1
ZODIACSNAP25-AS1
Ontologies - Pathways
Huge Navigator SNAP25-AS1 [HugePedia]
snp3D : Map Gene to Disease100131208
BioCentury BCIQSNAP25-AS1
ClinGenSNAP25-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131208
Clinical trialSNAP25-AS1
Miscellaneous
canSAR (ICR)SNAP25-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNAP25-AS1
EVEXSNAP25-AS1
GoPubMedSNAP25-AS1
iHOPSNAP25-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:44:19 CET 2017

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