Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNAP47-AS1 (SNAP47 antisense RNA 1)

Identity

Alias_namesSNAP47-IT1
SNAP47 intronic transcript 1 (non-protein coding)
SNAP47 antisense RNA 1 (non-protein coding)
Other alias
HGNC (Hugo) SNAP47-AS1
LocusID (NCBI) 100885800
Atlas_Id 73600
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 227931532 and ends at 227934892 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SNAP47-AS1   41501
Cards
Entrez_Gene (NCBI)SNAP47-AS1  100885800  SNAP47 antisense RNA 1
AliasesSNAP47-IT1
GeneCards (Weizmann)SNAP47-AS1
Ensembl hg19 (Hinxton) [Gene_View]  chr1:227931532-227934892 [Contig_View]  SNAP47-AS1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:227931532-227934892 [Contig_View]  SNAP47-AS1 [Vega]
TCGA cBioPortalSNAP47-AS1
AceView (NCBI)SNAP47-AS1
Genatlas (Paris)SNAP47-AS1
WikiGenes100885800
SOURCE (Princeton)SNAP47-AS1
Genetics Home Reference (NIH)SNAP47-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SNAP47-AS1  -     chr1:227931532-227934892 -  1q42.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNAP47-AS1  -     1q42.13   [Description]    (hg38-Dec_2013)
EnsemblSNAP47-AS1 - 1q42.13 [CytoView hg19]  SNAP47-AS1 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBISNAP47-AS1 [Mapview hg19]  SNAP47-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057311
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNAP47-AS1
Cluster EST : UnigeneHs.668786 [ NCBI ]
CGAP (NCI)Hs.668786
Gene ExpressionSNAP47-AS1 [ NCBI-GEO ]   SNAP47-AS1 [ EBI - ARRAY_EXPRESS ]   SNAP47-AS1 [ SEEK ]   SNAP47-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SNAP47-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100885800
GTEX Portal (Tissue expression)SNAP47-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNAP47-AS1
DMDM Disease mutations100885800
Blocks (Seattle)SNAP47-AS1
Protein Interaction databases
BioGRIDSNAP47-AS1
STRING (EMBL)SNAP47-AS1
ZODIACSNAP47-AS1
Ontologies - Pathways
Huge Navigator SNAP47-AS1 [HugePedia]
snp3D : Map Gene to Disease100885800
BioCentury BCIQSNAP47-AS1
ClinGenSNAP47-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885800
Clinical trialSNAP47-AS1
Miscellaneous
canSAR (ICR)SNAP47-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNAP47-AS1
EVEXSNAP47-AS1
GoPubMedSNAP47-AS1
iHOPSNAP47-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:44:19 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.