SNAPC5 (small nuclear RNA activating complex polypeptide 5)

2014-11-01  

Identity

HGNC
LOCATION
15q22.31
LOCUSID
ALIAS
SNAP19
FUSION GENES

Other Information

Locus ID:

NCBI: 10302
MIM: 605979
HGNC: 15484
Ensembl: ENSG00000174446

Variants:

dbSNP: 10302
ClinVar: 10302
TCGA: ENSG00000174446
COSMIC: SNAPC5

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000174446ENST00000307979O75971
ENSG00000174446ENST00000316634O75971
ENSG00000174446ENST00000316634A0A024R5X1
ENSG00000174446ENST00000395589O75971
ENSG00000174446ENST00000395589A0A024R5X1
ENSG00000174446ENST00000562411O75971
ENSG00000174446ENST00000562411A0A024R5X1
ENSG00000174446ENST00000563480O75971
ENSG00000174446ENST00000563480A0A024R5X1
ENSG00000174446ENST00000565465H3BSI3
ENSG00000174446ENST00000566658H3BSI3
ENSG00000174446ENST00000568875H3BQA0

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
RNA Polymerase I, RNA Polymerase III, and Mitochondrial TranscriptionREACTOMER-HSA-504046
RNA Polymerase III TranscriptionREACTOMER-HSA-74158
RNA Polymerase III Abortive And Retractive InitiationREACTOMER-HSA-749476
RNA Polymerase III Transcription InitiationREACTOMER-HSA-76046
RNA Polymerase III Transcription Initiation From Type 3 PromoterREACTOMER-HSA-76071
RNA polymerase II transcribes snRNA genesREACTOMER-HSA-6807505

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
276556372016COL3A1 and SNAP91: novel glioblastoma markers with diagnostic and prognostic value.20

Citation

Dessen P

SNAPC5 (small nuclear RNA activating complex polypeptide 5)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73605/snapc5