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SNAR-C1 (small ILF3/NF90-associated RNA C1)

Identity

Other alias-
HGNC (Hugo) SNAR-C1
LocusID (NCBI) 100170225
Atlas_Id 73623
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 47913051 and ends at 47913170 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNAR-C1   34319
Cards
Entrez_Gene (NCBI)SNAR-C1  100170225  small ILF3/NF90-associated RNA C1
Aliases
GeneCards (Weizmann)SNAR-C1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:47913051-47913170 [Contig_View]  SNAR-C1 [Vega]
TCGA cBioPortalSNAR-C1
AceView (NCBI)SNAR-C1
Genatlas (Paris)SNAR-C1
WikiGenes100170225
SOURCE (Princeton)SNAR-C1
Genetics Home Reference (NIH)SNAR-C1
Genomic and cartography
GoldenPath hg38 (UCSC)SNAR-C1  -     chr19:47913051-47913170 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNAR-C1  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblSNAR-C1 - 19q13.33 [CytoView hg19]  SNAR-C1 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBISNAR-C1 [Mapview hg19]  SNAR-C1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNAR-C1
Cluster EST : UnigeneHs.717052 [ NCBI ]
CGAP (NCI)Hs.717052
Gene ExpressionSNAR-C1 [ NCBI-GEO ]   SNAR-C1 [ EBI - ARRAY_EXPRESS ]   SNAR-C1 [ SEEK ]   SNAR-C1 [ MEM ]
Gene Expression Viewer (FireBrowse)SNAR-C1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100170225
GTEX Portal (Tissue expression)SNAR-C1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNAR-C1
DMDM Disease mutations100170225
Blocks (Seattle)SNAR-C1
Protein Interaction databases
BioGRIDSNAR-C1
STRING (EMBL)SNAR-C1
ZODIACSNAR-C1
Ontologies - Pathways
Huge Navigator SNAR-C1 [HugePedia]
snp3D : Map Gene to Disease100170225
BioCentury BCIQSNAR-C1
ClinGenSNAR-C1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100170225
Chemical/Pharm GKB GenePA162404041
Clinical trialSNAR-C1
Miscellaneous
canSAR (ICR)SNAR-C1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNAR-C1
EVEXSNAR-C1
GoPubMedSNAR-C1
iHOPSNAR-C1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:39:58 CET 2017

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