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SNCA-AS1 (SNCA antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SNCA-AS1
LocusID (NCBI) 644248
Atlas_Id 73635
Location 4q22.1  [Link to chromosome band 4q22]
Location_base_pair Starts at 90757552 and ends at 90763142 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNCA-AS1   50600
Cards
Entrez_Gene (NCBI)SNCA-AS1  644248  SNCA antisense RNA 1
Aliases
GeneCards (Weizmann)SNCA-AS1
Ensembl hg19 (Hinxton)ENSG00000247775 [Gene_View]  chr4:90757552-90763142 [Contig_View]  SNCA-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000247775 [Gene_View]  chr4:90757552-90763142 [Contig_View]  SNCA-AS1 [Vega]
ICGC DataPortalENSG00000247775
TCGA cBioPortalSNCA-AS1
AceView (NCBI)SNCA-AS1
Genatlas (Paris)SNCA-AS1
WikiGenes644248
SOURCE (Princeton)SNCA-AS1
Genetics Home Reference (NIH)SNCA-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SNCA-AS1  -     chr4:90757552-90763142 +  4q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNCA-AS1  -     4q22.1   [Description]    (hg38-Dec_2013)
EnsemblSNCA-AS1 - 4q22.1 [CytoView hg19]  SNCA-AS1 - 4q22.1 [CytoView hg38]
Mapping of homologs : NCBISNCA-AS1 [Mapview hg19]  SNCA-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123890 BG181213 HG497076 HG497077 KF728371
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NG_011851 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)SNCA-AS1
Cluster EST : UnigeneHs.553954 [ NCBI ]
CGAP (NCI)Hs.553954
Alternative Splicing GalleryENSG00000247775
Gene ExpressionSNCA-AS1 [ NCBI-GEO ]   SNCA-AS1 [ EBI - ARRAY_EXPRESS ]   SNCA-AS1 [ SEEK ]   SNCA-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SNCA-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644248
GTEX Portal (Tissue expression)SNCA-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNCA-AS1
DMDM Disease mutations644248
Blocks (Seattle)SNCA-AS1
Human Protein AtlasENSG00000247775
Protein Interaction databases
FunCoupENSG00000247775
BioGRIDSNCA-AS1
STRING (EMBL)SNCA-AS1
ZODIACSNCA-AS1
Ontologies - Pathways
Huge Navigator SNCA-AS1 [HugePedia]
snp3D : Map Gene to Disease644248
BioCentury BCIQSNCA-AS1
ClinGenSNCA-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644248
Clinical trialSNCA-AS1
Miscellaneous
canSAR (ICR)SNCA-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNCA-AS1
EVEXSNCA-AS1
GoPubMedSNCA-AS1
iHOPSNCA-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:44:27 CET 2017

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