SNF1LK2 (SNF1-like kinase 2)

Identity

Other names	DKFZp434K1115
	KIAA0781
	LOH11CR1I
	QIK
	SIK2
Hugo	SNF1LK2
Location	11q23.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	SNF1LK2
GDB	SNF1LK2
Entrez_Gene	SNF1LK2  23235  SNF1-like kinase 2
	Cards
GeneCards	SNF1LK2
Ensembl	SNF1LK2 [Search_View]   ENSG00000170145 [Gene_View]
Genatlas	SNF1LK2
GeneLynx	SNF1LK2
eGenome	SNF1LK2
euGene	23235
	Genomic and cartography
GoldenPath	SNF1LK2  -  11q23.1   chr11:110978380-111102840 +  11q23.1   [Description]    (hg18-March_2006)
Ensembl	SNF1LK2 - 11q23.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SNF1LK2
	Gene and transcription
Genbank	AB018324 [ ENTREZ ]
Genbank	AB084424 [ ENTREZ ]
Genbank	AB096248 [ ENTREZ ]
Genbank	AK000396 [ ENTREZ ]
Genbank	AK096463 [ ENTREZ ]
RefSeq	NM_015191 [ SRS ]    NM_015191 [ ENTREZ ]
RefSeq	AC_000054 [ SRS ]    AC_000054 [ ENTREZ ]
RefSeq	AC_000143 [ SRS ]    AC_000143 [ ENTREZ ]
RefSeq	NC_000011 [ SRS ]    NC_000011 [ ENTREZ ]
RefSeq	NT_033899 [ SRS ]    NT_033899 [ ENTREZ ]
RefSeq	NW_001838042 [ SRS ]    NW_001838042 [ ENTREZ ]
RefSeq	NW_925173 [ SRS ]    NW_925173 [ ENTREZ ]
AceView	SNF1LK2 AceView - NCBI
Unigene	Hs.269128 [ SRS ]    Hs.269128 [ NCBI ]     HS269128 [ spliceNest ]
Fast-db	13730 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9H0K1 [ SRS]    Q9H0K1 [ EXPASY ]     Q9H0K1 [ INTERPRO ]
Prosite	PS00107 PROTEIN_KINASE_ATP [ SRS ]    PS00107 PROTEIN_KINASE_ATP [ Expasy ]
Prosite	PS50011 PROTEIN_KINASE_DOM [ SRS ]    PS50011 PROTEIN_KINASE_DOM [ Expasy ]
Prosite	PS00108 PROTEIN_KINASE_ST [ SRS ]    PS00108 PROTEIN_KINASE_ST [ Expasy ]
Prosite	PS50030 UBA [ SRS ]    PS50030 UBA [ Expasy ]
Interpro	IPR000719 Prot_kinase_core [ SRS ]    IPR000719 Prot_kinase_core [ EBI ]
Interpro	IPR017441 Protein_kinase_ATP_bd_CS [ SRS ]    IPR017441 Protein_kinase_ATP_bd_CS [ EBI ]
Interpro	IPR017090 Ser/Thr_prot_kinase_SNF1-like [ SRS ]    IPR017090 Ser/Thr_prot_kinase_SNF1-like [ EBI ]
Interpro	IPR008271 Ser_thr_pkin_AS [ SRS ]    IPR008271 Ser_thr_pkin_AS [ EBI ]
Interpro	IPR002290 Ser_thr_pkinase [ SRS ]    IPR002290 Ser_thr_pkinase [ EBI ]
Interpro	IPR015738 Snf1_like_pk [ SRS ]    IPR015738 Snf1_like_pk [ EBI ]
Interpro	IPR015940 UBA/transl_elong_EF1B_N_euk [ SRS ]    IPR015940 UBA/transl_elong_EF1B_N_euk [ EBI ]
CluSTr	Q9H0K1
Smart	SM00220 S_TKc [EMBL]
Prodom	PD000001 Prot_kinase[INRA-Toulouse]
Prodom	Q9H0K1 SN1L2_HUMAN [ Domain structure ]   Q9H0K1 SN1L2_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9H0K1
PDB	SNF1LK2 [ SRS ]    SNF1LK2 [ PdbSum ],   SNF1LK2 [ IMB ]   SNF1LK2 [ RSDB ]
HPRD	12348
	Protein Interaction databases
DIP	Q9H0K1
IntAct	Q9H0K1
	Polymorphism : SNP, mutations, diseases
OMIM	608973    [ map ]
GENECLINICS	608973
SNP	SNF1LK2 [dbSNP-NCBI]
SNP	NM_015191 [SNP-NCI]
SNP	SNF1LK2 [GeneSNPs - Utah]  SNF1LK2] [HGBASE - SRS]
HAPMAP	SNF1LK2 [HAPMAP]
COSMIC	SNF1LK2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	SNF1LK2
	General knowledge
Family Browser	SNF1LK2 [UCSC Family Browser]
SOURCE	NM_015191
SMD	Hs.269128
SAGE	Hs.269128
Enzyme	2.7.11.1 [ Enzyme-Expasy ]   2.7.11.1 [ Enzyme-SRS ]   2.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   2.7.11.1 [ WIT ]
GO	nucleotide binding [Amigo]  nucleotide binding
GO	magnesium ion binding [Amigo]  magnesium ion binding
GO	protein serine/threonine kinase activity [Amigo]  protein serine/threonine kinase activity
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	protein amino acid phosphorylation [Amigo]  protein amino acid phosphorylation
GO	protein kinase cascade [Amigo]  protein kinase cascade
GO	transferase activity [Amigo]  transferase activity
GO	regulation of insulin receptor signaling pathway [Amigo]  regulation of insulin receptor signaling pathway
PubGene	SNF1LK2
TreeFam	SNF1LK2
CTD	23235 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SNF1LK2 Related clones (RZPD - Berlin)
	PubMed
PubMed	13 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Jul 14 17:27:57 2008