Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SNHG14 (small nucleolar RNA host gene 14)

Identity

Alias_namesUBE3A-AS1
UBE3A antisense RNA 1 (non-protein coding)
small nucleolar RNA host gene 14 (non-protein coding)
Alias_symbol (synonym)NCRNA00214
UBE3A-AS
Other alias115HG
IC-SNURF-SNRPN
LNCAT
U-UBE3A-ATS
UBE3AATS
HGNC (Hugo) SNHG14
LocusID (NCBI) 104472715
Atlas_Id 80077
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 24823608 and ends at 25419461 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNHG14   37462
Cards
Entrez_Gene (NCBI)SNHG14  104472715  small nucleolar RNA host gene 14
Aliases115HG; IC-SNURF-SNRPN; LNCAT; NCRNA00214; 
U-UBE3A-ATS; UBE3A-AS; UBE3A-AS1; UBE3AATS
GeneCards (Weizmann)SNHG14
Ensembl hg19 (Hinxton)ENSG00000224078 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224078 [Gene_View]  chr15:24823608-25419461 [Contig_View]  SNHG14 [Vega]
ICGC DataPortalENSG00000224078
TCGA cBioPortalSNHG14
AceView (NCBI)SNHG14
Genatlas (Paris)SNHG14
WikiGenes104472715
SOURCE (Princeton)SNHG14
Genetics Home Reference (NIH)SNHG14
Genomic and cartography
GoldenPath hg38 (UCSC)SNHG14  -     chr15:24823608-25419461 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNHG14  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblSNHG14 - 15q11.2 [CytoView hg19]  SNHG14 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBISNHG14 [Mapview hg19]  SNHG14 [Mapview hg38]
OMIM616259   
Gene and transcription
Genbank (Entrez)AF319522 AF319523 AF319524 AF400485 AF400486
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNHG14
Cluster EST : UnigeneHs.737651 [ NCBI ]
CGAP (NCI)Hs.737651
Alternative Splicing GalleryENSG00000224078
Gene ExpressionSNHG14 [ NCBI-GEO ]   SNHG14 [ EBI - ARRAY_EXPRESS ]   SNHG14 [ SEEK ]   SNHG14 [ MEM ]
Gene Expression Viewer (FireBrowse)SNHG14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104472715
GTEX Portal (Tissue expression)SNHG14
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNHG14
DMDM Disease mutations104472715
Blocks (Seattle)SNHG14
Human Protein AtlasENSG00000224078
Protein Interaction databases
FunCoupENSG00000224078
BioGRIDSNHG14
STRING (EMBL)SNHG14
ZODIACSNHG14
Ontologies - Pathways
Huge Navigator SNHG14 [HugePedia]
snp3D : Map Gene to Disease104472715
BioCentury BCIQSNHG14
ClinGenSNHG14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104472715
Clinical trialSNHG14
Miscellaneous
canSAR (ICR)SNHG14 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNHG14
EVEXSNHG14
GoPubMedSNHG14
iHOPSNHG14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:38:41 CEST 2017

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