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SNHG18 (small nucleolar RNA host gene 18)

Identity

Alias_namessmall nucleolar RNA host gene 18 (non-protein coding)
Other alias-
HGNC (Hugo) SNHG18
LocusID (NCBI) 100505806
Atlas_Id 73644
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 9546312 and ends at 9550409 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNHG18   49007
Cards
Entrez_Gene (NCBI)SNHG18  100505806  small nucleolar RNA host gene 18
Aliases
GeneCards (Weizmann)SNHG18
Ensembl hg19 (Hinxton)ENSG00000250786 [Gene_View]  chr5:9546312-9550409 [Contig_View]  SNHG18 [Vega]
Ensembl hg38 (Hinxton)ENSG00000250786 [Gene_View]  chr5:9546312-9550409 [Contig_View]  SNHG18 [Vega]
ICGC DataPortalENSG00000250786
TCGA cBioPortalSNHG18
AceView (NCBI)SNHG18
Genatlas (Paris)SNHG18
WikiGenes100505806
SOURCE (Princeton)SNHG18
Genetics Home Reference (NIH)SNHG18
Genomic and cartography
GoldenPath hg19 (UCSC)SNHG18  -     chr5:9546312-9550409 +  5p15.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNHG18  -     5p15.31   [Description]    (hg38-Dec_2013)
EnsemblSNHG18 - 5p15.31 [CytoView hg19]  SNHG18 - 5p15.31 [CytoView hg38]
Mapping of homologs : NCBISNHG18 [Mapview hg19]  SNHG18 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM676492 BM796927 DA542304 HG497747 HG497748
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)SNHG18
Cluster EST : UnigeneHs.34447 [ NCBI ]
CGAP (NCI)Hs.34447
Alternative Splicing GalleryENSG00000250786
Gene ExpressionSNHG18 [ NCBI-GEO ]   SNHG18 [ EBI - ARRAY_EXPRESS ]   SNHG18 [ SEEK ]   SNHG18 [ MEM ]
Gene Expression Viewer (FireBrowse)SNHG18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505806
GTEX Portal (Tissue expression)SNHG18
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNHG18
DMDM Disease mutations100505806
Blocks (Seattle)SNHG18
Human Protein AtlasENSG00000250786
Protein Interaction databases
FunCoupENSG00000250786
BioGRIDSNHG18
STRING (EMBL)SNHG18
ZODIACSNHG18
Ontologies - Pathways
Huge Navigator SNHG18 [HugePedia]
snp3D : Map Gene to Disease100505806
BioCentury BCIQSNHG18
ClinGenSNHG18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505806
Clinical trialSNHG18
Miscellaneous
canSAR (ICR)SNHG18 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNHG18
EVEXSNHG18
GoPubMedSNHG18
iHOPSNHG18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:44:28 CET 2017

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