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SNHG19 (small nucleolar RNA host gene 19)

Identity

Alias_namessmall nucleolar RNA host gene 19 (non-protein coding)
Alias_symbol (synonym)SNORD60HG
Other alias
HGNC (Hugo) SNHG19
LocusID (NCBI) 100507303
Atlas_Id 77745
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2204783 and ends at 2205359 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SNHG19   49574
Cards
Entrez_Gene (NCBI)SNHG19  100507303  small nucleolar RNA host gene 19
AliasesSNORD60HG
GeneCards (Weizmann)SNHG19
Ensembl hg19 (Hinxton)ENSG00000260260 [Gene_View]  chr16:2204783-2205359 [Contig_View]  SNHG19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260260 [Gene_View]  chr16:2204783-2205359 [Contig_View]  SNHG19 [Vega]
ICGC DataPortalENSG00000260260
TCGA cBioPortalSNHG19
AceView (NCBI)SNHG19
Genatlas (Paris)SNHG19
WikiGenes100507303
SOURCE (Princeton)SNHG19
Genetics Home Reference (NIH)SNHG19
Genomic and cartography
GoldenPath hg19 (UCSC)SNHG19  -     chr16:2204783-2205359 -  16p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNHG19  -     16p13.3   [Description]    (hg38-Dec_2013)
EnsemblSNHG19 - 16p13.3 [CytoView hg19]  SNHG19 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBISNHG19 [Mapview hg19]  SNHG19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010393 NW_004929400
Consensus coding sequences : CCDS (NCBI)SNHG19
Cluster EST : UnigeneHs.369728 [ NCBI ]
CGAP (NCI)Hs.369728
Alternative Splicing GalleryENSG00000260260
Gene ExpressionSNHG19 [ NCBI-GEO ]   SNHG19 [ EBI - ARRAY_EXPRESS ]   SNHG19 [ SEEK ]   SNHG19 [ MEM ]
Gene Expression Viewer (FireBrowse)SNHG19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507303
GTEX Portal (Tissue expression)SNHG19
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNHG19
DMDM Disease mutations100507303
Blocks (Seattle)SNHG19
Human Protein AtlasENSG00000260260
Protein Interaction databases
FunCoupENSG00000260260
BioGRIDSNHG19
STRING (EMBL)SNHG19
ZODIACSNHG19
Ontologies - Pathways
Huge Navigator SNHG19 [HugePedia]
snp3D : Map Gene to Disease100507303
BioCentury BCIQSNHG19
ClinGenSNHG19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507303
Clinical trialSNHG19
Miscellaneous
canSAR (ICR)SNHG19 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNHG19
EVEXSNHG19
GoPubMedSNHG19
iHOPSNHG19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:44:28 CET 2017

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