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SNHG26 (small nucleolar RNA host gene 26)

Identity

Alias_symbol (synonym)AC005682.5
Other alias-
HGNC (Hugo) SNHG26
LocusID (NCBI) 109729180
Atlas_Id 79040
Location 7p15.3  [Link to chromosome band 7p15]
Location_base_pair Starts at 22854240 and ends at 22861436 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNHG26   53131
Cards
Entrez_Gene (NCBI)SNHG26  109729180  small nucleolar RNA host gene 26
Aliases
GeneCards (Weizmann)SNHG26
Ensembl hg19 (Hinxton)ENSG00000228649 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228649 [Gene_View]  chr7:22854240-22861436 [Contig_View]  SNHG26 [Vega]
ICGC DataPortalENSG00000228649
TCGA cBioPortalSNHG26
AceView (NCBI)SNHG26
Genatlas (Paris)SNHG26
WikiGenes109729180
SOURCE (Princeton)SNHG26
Genetics Home Reference (NIH)SNHG26
Genomic and cartography
GoldenPath hg38 (UCSC)SNHG26  -     chr7:22854240-22861436 +  7p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNHG26  -     7p15.3   [Description]    (hg19-Feb_2009)
EnsemblSNHG26 - 7p15.3 [CytoView hg19]  SNHG26 - 7p15.3 [CytoView hg38]
Mapping of homologs : NCBISNHG26 [Mapview hg19]  SNHG26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA660320
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNHG26
Cluster EST : UnigeneHs.553139 [ NCBI ]
CGAP (NCI)Hs.553139
Alternative Splicing GalleryENSG00000228649
Gene ExpressionSNHG26 [ NCBI-GEO ]   SNHG26 [ EBI - ARRAY_EXPRESS ]   SNHG26 [ SEEK ]   SNHG26 [ MEM ]
Gene Expression Viewer (FireBrowse)SNHG26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109729180
GTEX Portal (Tissue expression)SNHG26
Human Protein AtlasENSG00000228649-SNHG26 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNHG26
DMDM Disease mutations109729180
Blocks (Seattle)SNHG26
Human Protein Atlas [tissue]ENSG00000228649-SNHG26 [tissue]
Protein Interaction databases
FunCoupENSG00000228649
BioGRIDSNHG26
STRING (EMBL)SNHG26
ZODIACSNHG26
Ontologies - Pathways
Huge Navigator SNHG26 [HugePedia]
snp3D : Map Gene to Disease109729180
BioCentury BCIQSNHG26
ClinGenSNHG26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109729180
Clinical trialSNHG26
Miscellaneous
canSAR (ICR)SNHG26 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNHG26
EVEXSNHG26
GoPubMedSNHG26
iHOPSNHG26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:11 CET 2017

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