Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNHG29 (small nucleolar RNA host gene 29)

Identity

Alias (NCBI)C17orf45
C17orf76-AS1
FAM211A-AS1
LRRC75A-AS1
NCRNA00188
TSAP19
HGNC (Hugo) SNHG29
HGNC Alias symbMGC40157
HGNC Previous nameC17orf45
 NCRNA00188
 C17orf76-AS1
 FAM211A-AS1
HGNC Previous namechromosome 17 open reading frame 45
 non-protein coding RNA 188
 C17orf76 antisense RNA 1 (non-protein coding)
 C17orf76 antisense RNA 1
 FAM211A antisense RNA 1
LocusID (NCBI) 125144
Atlas_Id 68654
Location 17p11.2  [Link to chromosome band 17p11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)SNHG29   28619
Cards
Entrez_Gene (NCBI)SNHG29    small nucleolar RNA host gene 29
AliasesC17orf45; C17orf76-AS1; FAM211A-AS1; LRRC75A-AS1; 
NCRNA00188; TSAP19
GeneCards (Weizmann)SNHG29
Ensembl hg19 (Hinxton)ENSG00000175061 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175061 [Gene_View]  ENSG00000175061 [Sequence]  - [Contig_View]  SNHG29 [Vega]
ICGC DataPortalENSG00000175061
TCGA cBioPortalSNHG29
AceView (NCBI)SNHG29
Genatlas (Paris)SNHG29
SOURCE (Princeton)SNHG29
Genetics Home Reference (NIH)SNHG29
Genomic and cartography
GoldenPath hg38 (UCSC)SNHG29  -  
GoldenPath hg19 (UCSC)SNHG29  -  
GoldenPathSNHG29 - [CytoView hg19]  SNHG29 - [CytoView hg38]
ImmunoBaseENSG00000175061
Genome Data Viewer NCBISNHG29 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ012499 AK098643 AK307982 AK308482 AK309961
RefSeq transcript (Entrez)NM_152350
Consensus coding sequences : CCDS (NCBI)SNHG29
Gene ExpressionSNHG29 [ NCBI-GEO ]   SNHG29 [ EBI - ARRAY_EXPRESS ]   SNHG29 [ SEEK ]   SNHG29 [ MEM ]
Gene Expression Viewer (FireBrowse)SNHG29 [ Firebrowse - Broad ]
GenevisibleExpression of SNHG29 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)125144
GTEX Portal (Tissue expression)SNHG29
Human Protein AtlasENSG00000175061-SNHG29 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNHG29
Human Protein Atlas [tissue]ENSG00000175061-SNHG29 [tissue]
HPRD17549
Protein Interaction databases
BioGRIDSNHG29
STRING (EMBL)SNHG29
ZODIACSNHG29
Ontologies - Pathways
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNHG29
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:21:45 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.