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SNHG32 (small nucleolar RNA host gene 32)

Identity

Alias_symbol (synonym)D6S57
G8
Other aliasC6orf48
HGNC (Hugo) SNHG32
LocusID (NCBI) 50854
Atlas_Id 53559
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31834915 and ends at 31839766 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SNHG32   19078
Cards
Entrez_Gene (NCBI)SNHG32  50854  small nucleolar RNA host gene 32
AliasesC6orf48; D6S57; G8
GeneCards (Weizmann)SNHG32
Ensembl hg19 (Hinxton)ENSG00000204387 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204387 [Gene_View]  ENSG00000204387 [Sequence]  chr6:31834915-31839766 [Contig_View]  SNHG32 [Vega]
ICGC DataPortalENSG00000204387
TCGA cBioPortalSNHG32
AceView (NCBI)SNHG32
Genatlas (Paris)SNHG32
WikiGenes50854
SOURCE (Princeton)SNHG32
Genetics Home Reference (NIH)SNHG32
Genomic and cartography
GoldenPath hg38 (UCSC)SNHG32  -     chr6:31834915-31839766 +  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNHG32  -     -   [Description]    (hg19-Feb_2009)
GoldenPathSNHG32 - - [CytoView hg19]  SNHG32 - - [CytoView hg38]
ImmunoBaseENSG00000204387
Mapping of homologs : NCBISNHG32 [Mapview hg19]  SNHG32 [Mapview hg38]
OMIM605447   
Gene and transcription
Genbank (Entrez)AA720680 AJ249731 AJ249731 AJ249732 AK311989
RefSeq transcript (Entrez)NM_001040437 NM_001040438 NM_001287482 NM_001287483 NM_001287484 NM_001287485 NM_001287486 NM_001287487 NM_001287488 NM_016947
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167244 NT_167245 NT_167248
Consensus coding sequences : CCDS (NCBI)SNHG32
Cluster EST : UnigeneHs.714250 [ NCBI ]
CGAP (NCI)Hs.714250
Alternative Splicing GalleryENSG00000204387
Gene ExpressionSNHG32 [ NCBI-GEO ]   SNHG32 [ EBI - ARRAY_EXPRESS ]   SNHG32 [ SEEK ]   SNHG32 [ MEM ]
Gene Expression Viewer (FireBrowse)SNHG32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)50854
GTEX Portal (Tissue expression)SNHG32
Human Protein AtlasENSG00000204387-SNHG32 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNHG32
DMDM Disease mutations50854
Blocks (Seattle)SNHG32
Human Protein Atlas [tissue]ENSG00000204387-SNHG32 [tissue]
HPRD12015
IPIIPI00383662   IPI01018684   IPI01010488   
Protein Interaction databases
FunCoupENSG00000204387
BioGRIDSNHG32
STRING (EMBL)SNHG32
ZODIACSNHG32
Ontologies - Pathways
Huge Navigator SNHG32 [HugePedia]
snp3D : Map Gene to Disease50854
BioCentury BCIQSNHG32
ClinGenSNHG32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50854
Chemical/Pharm GKB GenePA38786
Clinical trialSNHG32
Miscellaneous
canSAR (ICR)SNHG32 (select the gene name)
DataMed IndexSNHG32
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNHG32
EVEXSNHG32
GoPubMedSNHG32
iHOPSNHG32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 12 15:56:35 CEST 2019

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