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SNORA1 (small nucleolar RNA, H/ACA box 1)

Identity

Alias (NCBI)ACA1
HGNC (Hugo) SNORA1
HGNC Alias symbACA1
LocusID (NCBI) 677792
Atlas_Id 73655
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 93732004 and ends at 93732133 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNORA1   32557
Cards
Entrez_Gene (NCBI)SNORA1    small nucleolar RNA, H/ACA box 1
AliasesACA1
GeneCards (Weizmann)SNORA1
Ensembl hg19 (Hinxton)ENSG00000206834 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206834 [Gene_View]  ENSG00000206834 [Sequence]  chr11:93732004-93732133 [Contig_View]  SNORA1 [Vega]
ICGC DataPortalENSG00000206834
TCGA cBioPortalSNORA1
AceView (NCBI)SNORA1
Genatlas (Paris)SNORA1
SOURCE (Princeton)SNORA1
Genetics Home Reference (NIH)SNORA1
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA1  -     chr11:93732004-93732133 -  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA1  -     11q21   [Description]    (hg19-Feb_2009)
GoldenPathSNORA1 - 11q21 [CytoView hg19]  SNORA1 - 11q21 [CytoView hg38]
ImmunoBaseENSG00000206834
Genome Data Viewer NCBISNORA1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ609425
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA1
Gene ExpressionSNORA1 [ NCBI-GEO ]   SNORA1 [ EBI - ARRAY_EXPRESS ]   SNORA1 [ SEEK ]   SNORA1 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA1 [ Firebrowse - Broad ]
GenevisibleExpression of SNORA1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)677792
GTEX Portal (Tissue expression)SNORA1
Human Protein AtlasENSG00000206834-SNORA1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA1
Human Protein Atlas [tissue]ENSG00000206834-SNORA1 [tissue]
Protein Interaction databases
BioGRIDSNORA1
STRING (EMBL)SNORA1
ZODIACSNORA1
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNORA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:21:46 CEST 2021

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