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SNORA116 (small nucleolar RNA, H/ACA box 116)

Identity

Other alias-
HGNC (Hugo) SNORA116
LocusID (NCBI) 109623462
Atlas_Id 79984
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 158322982 and ends at 158323128 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA116   51854
Cards
Entrez_Gene (NCBI)SNORA116  109623462  small nucleolar RNA, H/ACA box 116
Aliases
GeneCards (Weizmann)SNORA116
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:158322982-158323128 [Contig_View]  SNORA116 [Vega]
TCGA cBioPortalSNORA116
AceView (NCBI)SNORA116
Genatlas (Paris)SNORA116
WikiGenes109623462
SOURCE (Princeton)SNORA116
Genetics Home Reference (NIH)SNORA116
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA116  -     chr6:158322982-158323128 +  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA116  -     6q25.3   [Description]    (hg19-Feb_2009)
EnsemblSNORA116 - 6q25.3 [CytoView hg19]  SNORA116 - 6q25.3 [CytoView hg38]
Mapping of homologs : NCBISNORA116 [Mapview hg19]  SNORA116 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA116
Gene ExpressionSNORA116 [ NCBI-GEO ]   SNORA116 [ EBI - ARRAY_EXPRESS ]   SNORA116 [ SEEK ]   SNORA116 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA116 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623462
GTEX Portal (Tissue expression)SNORA116
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA116
DMDM Disease mutations109623462
Blocks (Seattle)SNORA116
Protein Interaction databases
BioGRIDSNORA116
STRING (EMBL)SNORA116
ZODIACSNORA116
Ontologies - Pathways
Huge Navigator SNORA116 [HugePedia]
snp3D : Map Gene to Disease109623462
BioCentury BCIQSNORA116
ClinGenSNORA116
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623462
Clinical trialSNORA116
Miscellaneous
canSAR (ICR)SNORA116 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA116
EVEXSNORA116
GoPubMedSNORA116
iHOPSNORA116
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:30:27 CEST 2018

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