Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORA117 (small nucleolar RNA, H/ACA box 117)

Identity

Other alias-
HGNC (Hugo) SNORA117
LocusID (NCBI) 109623463
Atlas_Id 79837
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62882806 and ends at 62882903 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORA117   51855
Cards
Entrez_Gene (NCBI)SNORA117  109623463  small nucleolar RNA, H/ACA box 117
Aliases
GeneCards (Weizmann)SNORA117
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:62882806-62882903 [Contig_View]  SNORA117 [Vega]
TCGA cBioPortalSNORA117
AceView (NCBI)SNORA117
Genatlas (Paris)SNORA117
WikiGenes109623463
SOURCE (Princeton)SNORA117
Genetics Home Reference (NIH)SNORA117
Genomic and cartography
GoldenPath hg38 (UCSC)SNORA117  -     chr20:62882806-62882903 -  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORA117  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblSNORA117 - 20q13.33 [CytoView hg19]  SNORA117 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBISNORA117 [Mapview hg19]  SNORA117 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORA117
Gene ExpressionSNORA117 [ NCBI-GEO ]   SNORA117 [ EBI - ARRAY_EXPRESS ]   SNORA117 [ SEEK ]   SNORA117 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORA117 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623463
GTEX Portal (Tissue expression)SNORA117
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORA117
DMDM Disease mutations109623463
Blocks (Seattle)SNORA117
Protein Interaction databases
BioGRIDSNORA117
STRING (EMBL)SNORA117
ZODIACSNORA117
Ontologies - Pathways
Huge Navigator SNORA117 [HugePedia]
snp3D : Map Gene to Disease109623463
BioCentury BCIQSNORA117
ClinGenSNORA117
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623463
Clinical trialSNORA117
Miscellaneous
canSAR (ICR)SNORA117 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORA117
EVEXSNORA117
GoPubMedSNORA117
iHOPSNORA117
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:38:47 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.